Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RNU1-131P-201ENST00000458943 161 ntBASIC1.63□□□□□ -2.15
PHF1O43189 U8.20-201ENST00000459445 131 ntBASIC1.63□□□□□ -2.15
PHF1O43189 SNORA4.4-201ENST00000515921 135 ntBASIC1.63□□□□□ -2.15
PHF1O43189 RNU6-764P-201ENST00000516396 105 ntBASIC1.63□□□□□ -2.15
PHF1O43189 AC018448.1-201ENST00000552843 316 ntBASIC1.63□□□□□ -2.15
PHF1O43189 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
PHF1O43189 MIR4659A-201ENST00000580269 81 ntBASIC1.63□□□□□ -2.15
PHF1O43189 AL031274.2-201ENST00000599419 203 ntBASIC1.63□□□□□ -2.15
PHF1O43189 AC124312.5-201ENST00000604451 268 ntBASIC1.63□□□□□ -2.15
PHF1O43189 AC022202.1-201ENST00000613515 211 ntBASIC1.63□□□□□ -2.15
PHF1O43189 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PHF1O43189 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-727P-201ENST00000363592 107 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-1164P-201ENST00000364428 107 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-450P-201ENST00000364654 107 ntBASIC1.62□□□□□ -2.15
PHF1O43189 SNORD87-201ENST00000364849 89 ntBASIC1.62□□□□□ -2.15
PHF1O43189 Y_RNA.424-201ENST00000384063 103 ntBASIC1.62□□□□□ -2.15
PHF1O43189 SNORD14D-201ENST00000384390 87 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-1026P-201ENST00000384465 108 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
PHF1O43189 Y_RNA.527-201ENST00000384573 102 ntBASIC1.62□□□□□ -2.15
PHF1O43189 MIR548B-201ENST00000385247 97 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU2-20P-201ENST00000410425 191 ntBASIC1.62□□□□□ -2.15
PHF1O43189 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
PHF1O43189 TOMM22P2-201ENST00000430735 237 ntBASIC1.62□□□□□ -2.15
PHF1O43189 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.62□□□□□ -2.15
PHF1O43189 UQCRBP2-201ENST00000447827 297 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
PHF1O43189 AC010655.3-201ENST00000478818 450 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RPS29P30-201ENST00000600975 111 ntBASIC1.62□□□□□ -2.15
PHF1O43189 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
PHF1O43189 AL360085.1-201ENST00000604713 532 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RAC1P9-201ENST00000604990 392 ntBASIC1.62□□□□□ -2.15
PHF1O43189 AL078596.1-201ENST00000624856 447 ntBASIC1.62□□□□□ -2.15
PHF1O43189 RNU6-961P-201ENST00000363893 105 ntBASIC1.61□□□□□ -2.15
PHF1O43189 Y_RNA.361-201ENST00000365515 120 ntBASIC1.61□□□□□ -2.15
PHF1O43189 Y_RNA.389-201ENST00000383924 113 ntBASIC1.61□□□□□ -2.15
PHF1O43189 SNORD63-201ENST00000384262 68 ntBASIC1.61□□□□□ -2.15
PHF1O43189 Y_RNA.462-201ENST00000384268 102 ntBASIC1.61□□□□□ -2.15
PHF1O43189 MIR29C-201ENST00000385231 88 ntBASIC1.61□□□□□ -2.15
PHF1O43189 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PHF1O43189 MIR1185-2-201ENST00000408687 86 ntBASIC1.61□□□□□ -2.15
PHF1O43189 AL158823.1-201ENST00000418441 478 ntBASIC1.61□□□□□ -2.15
PHF1O43189 RAB28P5-201ENST00000427490 651 ntBASIC1.61□□□□□ -2.15
PHF1O43189 RNU6-221P-201ENST00000459541 99 ntBASIC1.61□□□□□ -2.15
PHF1O43189 AC114982.1-201ENST00000469402 321 ntBASIC1.61□□□□□ -2.15
PHF1O43189 AC025465.3-201ENST00000510570 311 ntBASIC1.61□□□□□ -2.15
PHF1O43189 RNU6-856P-201ENST00000516959 98 ntBASIC1.61□□□□□ -2.15
PHF1O43189 Y_RNA.713-201ENST00000517013 96 ntBASIC1.61□□□□□ -2.15
PHF1O43189 RNU1-117P-201ENST00000517041 158 ntBASIC1.61□□□□□ -2.15
PHF1O43189 Y_RNA.720-201ENST00000517166 92 ntBASIC1.61□□□□□ -2.15
PHF1O43189 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.61□□□□□ -2.15
PHF1O43189 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.61□□□□□ -2.15
PHF1O43189 MIR4753-201ENST00000585119 83 ntBASIC1.61□□□□□ -2.15
PHF1O43189 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
PHF1O43189 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.61□□□□□ -2.15
PHF1O43189 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.61□□□□□ -2.15
PHF1O43189 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.61□□□□□ -2.15
PHF1O43189 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PHF1O43189 LINC02555-201ENST00000563933 1951 ntBASIC1.61□□□□□ -2.15
PHF1O43189 RNU6-743P-201ENST00000364151 106 ntBASIC1.6□□□□□ -2.15
PHF1O43189 Y_RNA.230-201ENST00000364348 109 ntBASIC1.6□□□□□ -2.15
PHF1O43189 RNU6-1305P-201ENST00000364353 104 ntBASIC1.6□□□□□ -2.15
PHF1O43189 RNU6-438P-201ENST00000365561 103 ntBASIC1.6□□□□□ -2.15
PHF1O43189 Y_RNA.471-201ENST00000384312 102 ntBASIC1.6□□□□□ -2.15
PHF1O43189 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PHF1O43189 RPL21P1-201ENST00000399532 476 ntBASIC1.6□□□□□ -2.15
PHF1O43189 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.6□□□□□ -2.15
PHF1O43189 AC005002.2-201ENST00000438228 269 ntBASIC1.6□□□□□ -2.15
PHF1O43189 AC003989.2-201ENST00000440224 169 ntBASIC1.6□□□□□ -2.15
PHF1O43189 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.6□□□□□ -2.15
PHF1O43189 RNU6-625P-201ENST00000459412 107 ntBASIC1.6□□□□□ -2.15
PHF1O43189 HMGB3P17-201ENST00000504195 649 ntBASIC1.6□□□□□ -2.15
PHF1O43189 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PHF1O43189 AC055872.1-201ENST00000570978 278 ntBASIC1.6□□□□□ -2.15
PHF1O43189 AC026271.5-201ENST00000577873 130 ntBASIC1.6□□□□□ -2.15
PHF1O43189 AC005828.6-201ENST00000606610 232 ntBASIC1.6□□□□□ -2.15
PHF1O43189 AL773524.1-201ENST00000614065 229 ntBASIC1.6□□□□□ -2.15
PHF1O43189 AC011476.5-201ENST00000615594 130 ntBASIC1.6□□□□□ -2.15
PHF1O43189 snoZ196.1-201ENST00000625269 89 ntBASIC1.6□□□□□ -2.15
PHF1O43189 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.6□□□□□ -2.15
PHF1O43189 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
PHF1O43189 Y_RNA.162-201ENST00000363683 102 ntBASIC1.59□□□□□ -2.15
PHF1O43189 Y_RNA.183-201ENST00000363882 113 ntBASIC1.59□□□□□ -2.15
PHF1O43189 RNU6-454P-201ENST00000364292 107 ntBASIC1.59□□□□□ -2.15
PHF1O43189 SNORD114-6-201ENST00000364393 72 ntBASIC1.59□□□□□ -2.15
PHF1O43189 Y_RNA.570-201ENST00000384750 101 ntBASIC1.59□□□□□ -2.15
PHF1O43189 SNORA40.19-201ENST00000390846 128 ntBASIC1.59□□□□□ -2.15
PHF1O43189 MIR1283-2-201ENST00000408621 87 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AC016909.1-201ENST00000415916 166 ntBASIC1.59□□□□□ -2.15
PHF1O43189 MTND2P23-201ENST00000422990 651 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AL358176.2-201ENST00000425769 204 ntBASIC1.59□□□□□ -2.15
PHF1O43189 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AC074290.1-201ENST00000448883 135 ntBASIC1.59□□□□□ -2.15
PHF1O43189 MTND5P22-201ENST00000458380 195 ntBASIC1.59□□□□□ -2.15
PHF1O43189 RNU7-57P-201ENST00000459540 60 ntBASIC1.59□□□□□ -2.15
PHF1O43189 RNU6-408P-201ENST00000515910 100 ntBASIC1.59□□□□□ -2.15
PHF1O43189 RNU6-327P-201ENST00000516270 127 ntBASIC1.59□□□□□ -2.15
PHF1O43189 RNU6-948P-201ENST00000516374 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms