Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 AC019235.1-201ENST00000503847 207 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 RNA5SP20-201ENST00000515976 84 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 RNU6-1278P-201ENST00000516130 107 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 RNU6-1291P-201ENST00000516591 104 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 AC093023.1-201ENST00000547375 507 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 MIR3672-201ENST00000584290 82 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 ZNF299P-201ENST00000406845 1804 ntBASIC0.66□□□□□ -2.3
TRBV9A0A0B4J1U6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
TRBV9A0A0B4J1U6 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORD114-27-201ENST00000363766 70 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.256-201ENST00000364594 104 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-1264P-201ENST00000383891 107 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORD116-9-201ENST00000384000 95 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORD116-3-201ENST00000384287 95 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORD116-7-201ENST00000384404 95 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORD116-5-201ENST00000384462 95 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-908P-201ENST00000410160 94 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 UQCRBP2-201ENST00000447827 297 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 RPS26P48-201ENST00000491713 339 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 AC046134.1-201ENST00000514454 666 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR3973-201ENST00000579824 107 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 FAM106DP-201ENST00000586416 501 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 AL117336.2-201ENST00000602435 335 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 AC100812.1-201ENST00000607622 580 ntBASIC0.65□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR96-201ENST00000362288 78 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 RNA5SP361-201ENST00000362686 118 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.490-201ENST00000384413 102 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORA75.2-201ENST00000391138 150 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORA75.3-201ENST00000391231 150 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU1-139P-201ENST00000391307 165 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 MTATP6P17-201ENST00000431030 672 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 FABP5P4-201ENST00000437203 171 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AC233266.1-201ENST00000454518 96 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORA70.12-201ENST00000516084 153 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AC091178.2-201ENST00000584401 117 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AC004832.4-201ENST00000608952 331 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AC242852.1-201ENST00000612151 96 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AC244015.1-201ENST00000622301 99 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 AC073544.1-201ENST00000600110 1595 ntBASIC0.64□□□□□ -2.31
TRBV9A0A0B4J1U6 RNY3P3-201ENST00000363816 102 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORD116-11-201ENST00000383882 92 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-281P-201ENST00000384212 103 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR891A-201ENST00000401237 79 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 RPS4XP11-201ENST00000446897 772 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 AL049830.1-201ENST00000468034 425 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.688-201ENST00000516565 95 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 CBX3P8-201ENST00000532412 525 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 AC090617.3-201ENST00000573670 475 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR4781-201ENST00000585250 76 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 AL096861.1-201ENST00000610899 123 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRBV9A0A0B4J1U6 SNORA27.1-201ENST00000362604 124 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-451P-201ENST00000362921 107 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-595P-201ENST00000363944 107 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU4-12P-201ENST00000365233 139 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR520G-201ENST00000385064 90 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-332P-201ENST00000391193 108 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR1276-201ENST00000408707 83 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-1001P-201ENST00000411265 100 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-273P-201ENST00000516937 96 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR4698-201ENST00000577795 80 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.62□□□□□ -2.31
TRBV9A0A0B4J1U6 MIRLET7C-201ENST00000362160 84 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-596P-201ENST00000365395 98 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-163P-201ENST00000384396 106 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AC004941.2-201ENST00000427009 228 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU1-54P-201ENST00000517181 120 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 PRELID3BP2-201ENST00000605362 201 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AC012557.2-201ENST00000605919 418 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 AC245008.1-201ENST00000608123 476 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 233.7 ms