Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AC074290.1-201ENST00000448883 135 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AC067942.3-201ENST00000512025 362 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 Y_RNA.683-201ENST00000516508 93 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNU2-34P-201ENST00000516534 121 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 RNU6-107P-201ENST00000516643 102 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AP002001.1-203ENST00000534002 267 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AL442163.3-201ENST00000554110 156 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 VN1R91P-201ENST00000594377 169 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AC104695.3-201ENST00000604052 296 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AL078596.1-201ENST00000624856 447 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AC008873.1-201ENST00000625051 138 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 U6.92-201ENST00000636464 89 ntBASIC1.8□□□□□ -2.12
LYSMD4Q5XG99 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNU5F-3P-201ENST00000363767 117 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNU6-961P-201ENST00000363893 105 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNA5SP37-201ENST00000365420 130 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 SNORA40.9-201ENST00000515895 93 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNU6-948P-201ENST00000516374 107 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RN7SKP49-201ENST00000516675 260 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNU1-40P-201ENST00000516816 164 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNU1-97P-201ENST00000516872 164 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RNU6-856P-201ENST00000516959 98 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AC055872.1-201ENST00000570978 278 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AC016925.2-201ENST00000605108 242 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AL359821.1-201ENST00000605519 182 ntBASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
LYSMD4Q5XG99 AC005592.1-201ENST00000566527 1640 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 SNORA51.11-201ENST00000384442 131 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 RNU6-1235P-201ENST00000384559 107 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 Y_RNA.527-201ENST00000384573 102 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 SNORA48.1-201ENST00000390879 135 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 MRPL42P3-201ENST00000401492 326 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 AP1B1P2-201ENST00000416196 106 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 RNU6-498P-201ENST00000459468 107 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 RNU7-57P-201ENST00000459540 60 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 RNU6-408P-201ENST00000515910 100 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 SNORA25.10-201ENST00000515926 124 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 RNVU1-2-201ENST00000516326 135 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 AL021879.1-201ENST00000611756 288 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 MIR7111-201ENST00000619751 72 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 AC022513.1-201ENST00000624512 117 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.78□□□□□ -2.12
LYSMD4Q5XG99 RNY3P4-201ENST00000384428 101 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 MIR1302-11-201ENST00000408051 138 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 MIR1302-9-201ENST00000408365 138 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 MIR1302-10-201ENST00000408734 138 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 RNU6-57P-201ENST00000411348 103 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 UQCRBP2-201ENST00000447827 297 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 PCNPP5-201ENST00000452246 481 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC112492.4-201ENST00000456549 352 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC079804.2-201ENST00000490376 200 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC005840.1-201ENST00000498412 377 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 TRMT112P2-201ENST00000512910 132 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 RNU6-1012P-201ENST00000516606 109 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 RNU6-988P-201ENST00000519081 107 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC018448.1-201ENST00000552843 316 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 MIR4659A-201ENST00000580269 81 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 MIR1302-2-201ENST00000607096 138 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.77□□□□□ -2.13
LYSMD4Q5XG99 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.326-201ENST00000365176 113 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 SNORA33.2-201ENST00000365413 134 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 RNU4-52P-201ENST00000384209 138 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 AC060773.1-201ENST00000421698 310 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 RPL23AP7-203ENST00000449021 469 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 ATP5J2P3-201ENST00000451550 258 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 RPL26P26-201ENST00000480251 434 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 AC090255.1-201ENST00000495779 349 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 RNU6-966P-201ENST00000516479 104 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 AC040926.1-201ENST00000530195 238 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms