Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU2-1-201ENST00000618664 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.6-201ENST00000619225 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.5-201ENST00000619465 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.10-201ENST00000620268 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
NKX6-1P78426 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NKX6-1P78426 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NKX6-1P78426 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NKX6-1P78426 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.44□□□□□ -2.02
NKX6-1P78426 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 SNORA27.1-201ENST00000362604 124 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 RNU1-35P-201ENST00000362782 153 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 Y_RNA.352-201ENST00000365439 102 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 Y_RNA.489-201ENST00000384410 101 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 AL355796.1-201ENST00000406706 323 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 AC016909.1-201ENST00000415916 166 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.44□□□□□ -2.02
NKX6-1P78426 RPS27P22-201ENST00000478056 241 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 RNU6-1041P-201ENST00000516254 102 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 MIR3145-201ENST00000580727 82 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 MIR3670-2-201ENST00000582974 65 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 MIR3670-1-201ENST00000584160 65 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 MIR3670-3-201ENST00000584855 65 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 MIR3670-4-201ENST00000612260 65 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NKX6-1P78426 CENPCP1-201ENST00000533085 2578 ntBASIC2.44□□□□□ -2.02
NKX6-1P78426 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NKX6-1P78426 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NKX6-1P78426 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NKX6-1P78426 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.43□□□□□ -2.02
NKX6-1P78426 snoU2-30.2-201ENST00000362805 70 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 RNU4-80P-201ENST00000363200 141 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 Y_RNA.418-201ENST00000384029 102 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 MIR512-1-201ENST00000384913 84 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 MT-TG-201ENST00000387429 68 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 RNU2-61P-201ENST00000411069 191 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 AL451074.5-201ENST00000415894 435 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX6-1P78426 MTCO1P5-201ENST00000433573 344 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 AL513328.1-201ENST00000446460 224 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 RPL23AP7-203ENST00000449021 469 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 RNA5SP20-201ENST00000515976 84 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 RNU6-237P-201ENST00000515985 71 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 RNU6-1271P-201ENST00000517049 105 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX6-1P78426 AC110588.1-201ENST00000559699 137 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 AC012433.1-201ENST00000588916 398 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 AL590808.1-201ENST00000618696 141 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 MIR7843-201ENST00000622274 79 ntBASIC2.43□□□□□ -2.02
NKX6-1P78426 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.42□□□□□ -2.02
NKX6-1P78426 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX6-1P78426 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX6-1P78426 RNU6-859P-201ENST00000362728 107 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 Y_RNA.307-201ENST00000365022 117 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 Y_RNA.361-201ENST00000365515 120 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 Y_RNA.478-201ENST00000384358 107 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 Y_RNA.562-201ENST00000384695 113 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NKX6-1P78426 AL590004.2-201ENST00000404787 371 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.42□□□□□ -2.02
NKX6-1P78426 SUMO1P4-201ENST00000429430 302 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
NKX6-1P78426 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX6-1P78426 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.42□□□□□ -2.02
NKX6-1P78426 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NKX6-1P78426 Y_RNA.44-201ENST00000362676 108 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 Y_RNA.447-201ENST00000384184 113 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 Y_RNA.476-201ENST00000384347 108 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 RNU11-3P-201ENST00000391111 133 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 HSPE1P13-201ENST00000451143 297 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 AC091959.1-201ENST00000495857 238 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 RNU6-191P-201ENST00000516295 94 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 SNORA27.4-201ENST00000516650 95 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 MIR3169-201ENST00000578032 83 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 MIR4438-201ENST00000585271 93 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 AL353149.1-201ENST00000610667 244 ntBASIC2.41□□□□□ -2.02
NKX6-1P78426 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NKX6-1P78426 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NKX6-1P78426 Y_RNA.54-201ENST00000362766 105 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 SNORA20.1-201ENST00000364790 130 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 Y_RNA.416-201ENST00000384014 113 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 RNU6-417P-201ENST00000384712 107 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 MIR515-2-201ENST00000384883 83 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 MIR515-1-201ENST00000384884 83 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 RNU11-5P-201ENST00000391216 129 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 RNU6-855P-201ENST00000410395 104 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 BX510359.4-201ENST00000423750 193 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 Y_RNA.638-201ENST00000459374 113 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 RPS26P55-201ENST00000471178 356 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 RN7SL297P-201ENST00000483161 293 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms