Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL596327.1-201ENST00000603629 213 ntBASIC-1.13□□□□□ -2.59
GAFA1Q96PS6 SCARNA4-201ENST00000629045 128 ntBASIC-1.13□□□□□ -2.59
GAFA1Q96PS6 U3.4-201ENST00000363352 213 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 AC244250.2-201ENST00000418731 148 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 POLR2KP2-201ENST00000438155 177 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 AC074290.1-201ENST00000448883 135 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 RNU7-102P-201ENST00000458948 62 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 AC026414.1-201ENST00000504046 698 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 AC087894.1-201ENST00000538359 518 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 AC103996.1-201ENST00000555468 102 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 MIR3925-201ENST00000584674 77 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 AL139022.2-201ENST00000606934 443 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.14□□□□□ -2.59
GAFA1Q96PS6 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 RNU6-39P-201ENST00000384344 107 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 MIR452-201ENST00000385020 85 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 MT-TN-201ENST00000387400 73 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 SNORA26.5-201ENST00000391215 123 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 RNA5SP482-201ENST00000391269 118 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 SUMO1P3-201ENST00000439961 304 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 RNU6-221P-201ENST00000459541 99 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 AC104383.1-201ENST00000530297 370 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 DEFB131E-202ENST00000602581 683 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 AP002802.2-201ENST00000605877 235 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 snoZ196.1-201ENST00000625269 89 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 MIR4251-201ENST00000635819 61 ntBASIC-1.15□□□□□ -2.59
GAFA1Q96PS6 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 RNU6-396P-201ENST00000365369 105 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 RNU6-946P-201ENST00000383878 107 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 MIR586-201ENST00000385035 97 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 RNU6-293P-201ENST00000411259 106 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 FCF1P9-201ENST00000412546 282 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 AL031779.1-201ENST00000415663 330 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 MTATP6P23-201ENST00000440153 476 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 AC079781.2-201ENST00000446424 169 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 AC021451.1-201ENST00000523498 1129 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 RPL21P9-201ENST00000556149 474 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 AC125232.2-201ENST00000592457 143 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 AC005562.2-201ENST00000618264 111 ntBASIC-1.16□□□□□ -2.6
GAFA1Q96PS6 RNU4-21P-201ENST00000362802 126 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 RNU6-289P-201ENST00000364093 107 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 MIR873-201ENST00000401120 77 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 RNU2-42P-201ENST00000410697 113 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 AL360271.2-201ENST00000447710 161 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 RNU6-150P-201ENST00000516237 95 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 RNU2-56P-201ENST00000516826 190 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 RNU6-448P-201ENST00000517052 107 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 AC109479.2-201ENST00000517842 174 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 AC090617.3-201ENST00000573670 475 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 AC091304.10-201ENST00000641554 121 ntBASIC-1.17□□□□□ -2.6
GAFA1Q96PS6 RNA5SP205-201ENST00000364653 136 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 SNORA36A-201ENST00000384221 132 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNY1P7-201ENST00000384743 110 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-447P-201ENST00000410293 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-355P-201ENST00000410427 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-791P-201ENST00000410467 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-705P-201ENST00000410601 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-860P-201ENST00000410860 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU6-785P-201ENST00000411324 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 ELOCP21-201ENST00000412558 336 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 snoU13.19-201ENST00000459148 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 AC010424.1-201ENST00000506336 297 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 SNORD92-201ENST00000585078 85 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 AC008521.1-201ENST00000587471 187 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 U6.90-201ENST00000614007 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 AL359547.2-201ENST00000615810 418 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 U6.70-201ENST00000620287 104 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 AC231657.1-201ENST00000624313 397 ntBASIC-1.18□□□□□ -2.6
GAFA1Q96PS6 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 RNU6-1305P-201ENST00000364353 104 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 U8.5-201ENST00000364528 136 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 SNORA75.1-201ENST00000391130 148 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AL353572.1-201ENST00000442490 417 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AP000542.1-201ENST00000448473 371 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AC091951.3-201ENST00000504093 246 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 RNU6-469P-201ENST00000516253 101 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AL355375.2-201ENST00000574825 175 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AC138649.3-201ENST00000622154 254 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 AC027279.3-201ENST00000625055 122 ntBASIC-1.19□□□□□ -2.6
GAFA1Q96PS6 SNORA1B-201ENST00000362535 133 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms