Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNU6-407P-201ENST00000365280 104 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 Y_RNA.400-201ENST00000383963 111 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 MIR200C-201ENST00000384980 68 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 MIR526A2-201ENST00000390198 65 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 EBAG9P1-201ENST00000418955 543 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 CR769767.1-201ENST00000436337 346 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 HSPE1P13-201ENST00000451143 297 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHS1O60500 AC245047.8-201ENST00000456455 284 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 AC016925.1-201ENST00000458303 298 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 AC008155.2-201ENST00000464337 397 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 RN7SL633P-201ENST00000488974 297 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHS1O60500 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHS1O60500 SNORD116-25-201ENST00000516517 92 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 RNU6-1007P-201ENST00000516586 107 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHS1O60500 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHS1O60500 AC090616.3-201ENST00000582184 217 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.02□□□□□ -1.93
NPHS1O60500 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 MIR7157-201ENST00000635801 60 ntBASIC3.02□□□□□ -1.93
NPHS1O60500 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPHS1O60500 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
NPHS1O60500 AL035425.3-201ENST00000564206 4996 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RNU1-33P-201ENST00000364249 162 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 SNORA68.1-201ENST00000364537 132 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 Y_RNA.291-201ENST00000364886 113 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 MIR518C-201ENST00000384822 101 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 MIR616-201ENST00000385293 97 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RNU6-239P-201ENST00000390990 99 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RNU6-131P-201ENST00000391144 107 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RN7SKP27-201ENST00000410684 333 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RNU6-383P-201ENST00000410864 94 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHS1O60500 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHS1O60500 HMGN2P18-201ENST00000450680 270 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RPS26P55-201ENST00000471178 356 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 AC010598.1-201ENST00000510378 103 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RNU7-115P-201ENST00000516433 55 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 MIR4431-201ENST00000579990 94 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 AC013412.1-201ENST00000610687 192 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 AC096577.2-201ENST00000611455 153 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 MIR548AY-201ENST00000617669 107 ntBASIC3.01□□□□□ -1.93
NPHS1O60500 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPHS1O60500 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPHS1O60500 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NPHS1O60500 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3□□□□□ -1.93
NPHS1O60500 AC080128.1-201ENST00000474389 1917 ntBASIC3□□□□□ -1.93
NPHS1O60500 AL356292.1-201ENST00000283110 373 ntBASIC3□□□□□ -1.93
NPHS1O60500 RNU6-151P-201ENST00000364158 107 ntBASIC3□□□□□ -1.93
NPHS1O60500 Y_RNA.215-201ENST00000364204 112 ntBASIC3□□□□□ -1.93
NPHS1O60500 RNU6-438P-201ENST00000365561 103 ntBASIC3□□□□□ -1.93
NPHS1O60500 RNU6-81P-201ENST00000365608 104 ntBASIC3□□□□□ -1.93
NPHS1O60500 MT-TT-201ENST00000387460 66 ntBASIC3□□□□□ -1.93
NPHS1O60500 RPL27AP5-201ENST00000469428 449 ntBASIC3□□□□□ -1.93
NPHS1O60500 SEM1P1-201ENST00000506694 209 ntBASIC3□□□□□ -1.93
NPHS1O60500 RNU6-948P-201ENST00000516374 107 ntBASIC3□□□□□ -1.93
NPHS1O60500 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
NPHS1O60500 AC025647.1-201ENST00000517879 253 ntBASIC3□□□□□ -1.93
NPHS1O60500 AC109810.1-201ENST00000534066 224 ntBASIC3□□□□□ -1.93
NPHS1O60500 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3□□□□□ -1.93
NPHS1O60500 MIR3158-1-201ENST00000583596 81 ntBASIC3□□□□□ -1.93
NPHS1O60500 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3□□□□□ -1.93
NPHS1O60500 Y_RNA.778-201ENST00000620203 90 ntBASIC3□□□□□ -1.93
NPHS1O60500 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
NPHS1O60500 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
NPHS1O60500 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPHS1O60500 RNU6-271P-201ENST00000363858 105 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 RNU6-743P-201ENST00000364151 106 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 Y_RNA.229-201ENST00000364347 113 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 RNU6-144P-201ENST00000383951 107 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 RNU6-546P-201ENST00000383991 107 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 Y_RNA.488-201ENST00000384403 102 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 Y_RNA.497-201ENST00000384447 98 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 SNORD15B-201ENST00000384714 146 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 MIR490-201ENST00000384865 128 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 MIR449B-201ENST00000384995 97 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 SNORA36B-201ENST00000410438 131 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 RNU2-32P-201ENST00000411193 191 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.99□□□□□ -1.93
NPHS1O60500 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHS1O60500 RNA5SP20-201ENST00000515976 84 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 SNORA67.7-201ENST00000516664 135 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHS1O60500 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHS1O60500 AC022616.8-201ENST00000533569 253 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 MIR4724-201ENST00000579485 89 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHS1O60500 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NPHS1O60500 Z82209.1-201ENST00000422141 2135 ntBASIC2.99□□□□□ -1.93
NPHS1O60500 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPHS1O60500 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHS1O60500 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms