Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC022616.3-201ENST00000523940 148 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC104383.1-201ENST00000530297 370 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR548AO-201ENST00000579992 96 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AL359999.1-201ENST00000604513 294 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC002044.1-201ENST00000606707 158 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR8087-201ENST00000612745 78 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 uc_338.16-201ENST00000621804 95 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC011155.2-201ENST00000623202 216 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 SCARNA4-201ENST00000629045 128 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 U6.114-201ENST00000636407 96 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 ZNF204P-201ENST00000416749 2397 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR644A-201ENST00000385262 94 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR320B2-201ENST00000408479 138 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR1197-201ENST00000408818 88 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-757P-201ENST00000410334 100 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AL590632.1-201ENST00000424289 371 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 RPL23AP54-201ENST00000495129 419 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA74.3-201ENST00000517108 154 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AC105185.1-201ENST00000518705 535 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AP002004.2-201ENST00000531656 154 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AC093027.1-201ENST00000546698 429 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 RPL23AP91-201ENST00000569211 455 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR1273G-201ENST00000577677 100 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR4305-201ENST00000583252 102 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.34□□□□□ -2.46
TRAV13-1A0A0B4J241 U8.7-201ENST00000364940 136 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 RNA5SP95-201ENST00000410319 137 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 ZNF885P-201ENST00000420174 1098 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-341P-201ENST00000516973 96 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 SNORD11B-201ENST00000607707 90 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 AC010999.1-201ENST00000611856 324 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 AC104010.1-201ENST00000616889 150 ntBASIC-0.35□□□□□ -2.47
TRAV13-1A0A0B4J241 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-931P-201ENST00000363850 107 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-266P-201ENST00000364225 107 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-716P-201ENST00000365621 103 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 SNORA8.2-201ENST00000384372 139 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-393P-201ENST00000384475 107 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 MIR452-201ENST00000385020 85 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 SNORA75.6-201ENST00000391318 127 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 MIR1302-7-201ENST00000408841 72 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-613P-201ENST00000410412 108 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RPS3AP17-201ENST00000472594 777 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AC092436.3-201ENST00000511788 257 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU2-69P-201ENST00000516061 100 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU2-46P-201ENST00000517038 113 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AC011712.1-201ENST00000588959 234 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AC009159.2-201ENST00000617603 606 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 AL031667.3-201ENST00000620124 655 ntBASIC-0.36□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-434P-201ENST00000384376 107 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 MIR610-201ENST00000385139 96 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AL355143.1-201ENST00000407101 841 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AC005534.2-201ENST00000431047 433 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 MTCO2P3-201ENST00000442543 421 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AC091021.1-201ENST00000468051 388 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-977P-201ENST00000516411 103 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AC023442.1-201ENST00000531247 422 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AC023157.2-201ENST00000540596 141 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 HIF1AP1-201ENST00000553642 175 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 MIR4764-201ENST00000580680 88 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AC091178.2-201ENST00000584401 117 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AL355073.2-201ENST00000612106 557 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 AC006435.5-201ENST00000624486 112 ntBASIC-0.37□□□□□ -2.47
TRAV13-1A0A0B4J241 SNORA9.1-201ENST00000362412 131 ntBASIC-0.38□□□□□ -2.47
TRAV13-1A0A0B4J241 RNU6-227P-201ENST00000362865 103 ntBASIC-0.38□□□□□ -2.47
TRAV13-1A0A0B4J241 RNY1P12-201ENST00000364251 105 ntBASIC-0.38□□□□□ -2.47
TRAV13-1A0A0B4J241 SNORD14.1-201ENST00000365609 90 ntBASIC-0.38□□□□□ -2.47
TRAV13-1A0A0B4J241 PCNPP5-201ENST00000452246 481 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms