Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TCL6_2.1-201ENST00000615162 119 ntBASIC1.32□□□□□ -2.2
NPAS2Q99743 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.32□□□□□ -2.2
NPAS2Q99743 AC002553.4-201ENST00000616896 331 ntBASIC1.32□□□□□ -2.2
NPAS2Q99743 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.32□□□□□ -2.2
NPAS2Q99743 BX322639.1-202ENST00000423987 2213 ntBASIC1.32□□□□□ -2.2
NPAS2Q99743 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 RNU6-1059P-201ENST00000363752 98 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 SNORA72.2-201ENST00000365028 127 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 RNU6-1235P-201ENST00000384559 107 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NPAS2Q99743 RPL30P13-201ENST00000418873 348 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 RPL30P16-201ENST00000419341 429 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
NPAS2Q99743 AC060773.1-201ENST00000421698 310 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 RPS27P16-201ENST00000425758 201 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 OR2AQ1P-201ENST00000451972 200 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
NPAS2Q99743 RNU6-498P-201ENST00000459468 107 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 AC114982.1-201ENST00000469402 321 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 RPL23AP75-201ENST00000491601 451 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.31□□□□□ -2.2
NPAS2Q99743 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.31□□□□□ -2.2
NPAS2Q99743 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.31□□□□□ -2.2
NPAS2Q99743 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.31□□□□□ -2.2
NPAS2Q99743 AC005668.1-201ENST00000571142 476 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.31□□□□□ -2.2
NPAS2Q99743 AC009248.2-201ENST00000619826 254 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.31□□□□□ -2.2
NPAS2Q99743 AL133216.2-202ENST00000634512 349 ntBASIC1.31□□□□□ -2.2
NPAS2Q99743 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NPAS2Q99743 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NPAS2Q99743 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NPAS2Q99743 Y_RNA.269-201ENST00000364685 89 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 RNU6-418P-201ENST00000384035 107 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 Y_RNA.599-201ENST00000410489 109 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 AC004866.1-201ENST00000411748 78 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.3□□□□□ -2.2
NPAS2Q99743 MTND4LP16-201ENST00000440828 295 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 AC004386.2-201ENST00000441858 148 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 snoU13.27-201ENST00000459278 104 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.3□□□□□ -2.2
NPAS2Q99743 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.3□□□□□ -2.2
NPAS2Q99743 RNU6-948P-201ENST00000516374 107 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 RNA5SP384-201ENST00000516615 116 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 RNA5SP454-201ENST00000517231 127 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 MTND4LP26-201ENST00000518144 282 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.3□□□□□ -2.2
NPAS2Q99743 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
NPAS2Q99743 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.3□□□□□ -2.2
NPAS2Q99743 AC015688.6-201ENST00000577737 104 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 SNORA59B-202ENST00000578183 701 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 AC018638.8-201ENST00000588755 281 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 AC124303.1-201ENST00000605703 360 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 MIR338-201ENST00000636369 67 ntBASIC1.3□□□□□ -2.2
NPAS2Q99743 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
NPAS2Q99743 Y_RNA.301-201ENST00000364990 103 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 Y_RNA.473-201ENST00000384333 102 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 Y_RNA.505-201ENST00000384489 102 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
NPAS2Q99743 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.29□□□□□ -2.2
NPAS2Q99743 AL445305.1-201ENST00000432577 575 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 DAP3P1-201ENST00000441522 278 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.29□□□□□ -2.2
NPAS2Q99743 MTCO3P8-201ENST00000453691 755 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 AC082651.2-201ENST00000496833 166 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 ACA59.1-201ENST00000515966 143 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 Y_RNA.682-201ENST00000516457 100 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 RNU6-566P-201ENST00000516790 107 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 MIR5006-201ENST00000583027 110 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 AC060780.3-201ENST00000589464 80 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.29□□□□□ -2.2
NPAS2Q99743 MIR6128-201ENST00000615528 109 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 AC126177.8-201ENST00000618339 1015 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.29□□□□□ -2.2
NPAS2Q99743 AC095038.3-201ENST00000634439 195 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
NPAS2Q99743 Y_RNA.118-201ENST00000363300 101 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 RNU6-1013P-201ENST00000384180 107 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 RNU6-975P-201ENST00000384296 105 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 Y_RNA.508-201ENST00000384502 114 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 AL356776.1-201ENST00000406574 447 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.28□□□□□ -2.2
NPAS2Q99743 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
NPAS2Q99743 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.28□□□□□ -2.2
NPAS2Q99743 MTATP6P13-201ENST00000438531 667 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 AC009237.7-201ENST00000447357 229 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 MTND1P17-201ENST00000448961 204 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.28□□□□□ -2.2
NPAS2Q99743 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 RNU6-329P-201ENST00000459618 107 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 RPL30P7-201ENST00000479312 323 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 AC018710.1-201ENST00000506509 158 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms