Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-1090P-201ENST00000364065 94 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 RNU6-280P-201ENST00000364145 104 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 SNORA25.8-201ENST00000364831 128 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 SNORD87-201ENST00000364849 89 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 MIR1185-2-201ENST00000408687 86 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 RN7SKP200-201ENST00000410564 320 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 AL513185.2-201ENST00000425543 193 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 RPS27P1-201ENST00000450552 247 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.45□□□□□ -2.18
VMP1Q96GC9 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 AC109635.3-201ENST00000529536 185 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 MIR3672-201ENST00000584290 82 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.45□□□□□ -2.18
VMP1Q96GC9 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 AC009033.1-201ENST00000624279 431 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 U6.108-201ENST00000637764 58 ntBASIC1.45□□□□□ -2.18
VMP1Q96GC9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VMP1Q96GC9 RNU6-873P-201ENST00000363833 107 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 RNU4-40P-201ENST00000364351 143 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 Y_RNA.318-201ENST00000365131 97 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 SNORA17.3-201ENST00000391159 129 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.44□□□□□ -2.18
VMP1Q96GC9 AC010154.1-201ENST00000425857 269 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 RNU7-66P-201ENST00000459469 62 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 RNA5SP454-201ENST00000517231 127 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 AC027288.2-201ENST00000553028 243 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 AL137100.2-201ENST00000555786 315 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 TPRKBP2-201ENST00000565969 475 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.44□□□□□ -2.18
VMP1Q96GC9 AP000942.3-201ENST00000603702 160 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 AC021506.2-201ENST00000612354 169 ntBASIC1.44□□□□□ -2.18
VMP1Q96GC9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VMP1Q96GC9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 Y_RNA.414-201ENST00000384011 101 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.43□□□□□ -2.18
VMP1Q96GC9 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 AL589823.1-201ENST00000429577 183 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 AL606517.2-201ENST00000442855 241 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 RNU6-720P-201ENST00000516363 108 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.43□□□□□ -2.18
VMP1Q96GC9 SUMO2P16-201ENST00000519475 264 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 EIF1P4-201ENST00000572664 335 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 MZT1P2-201ENST00000604387 248 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 AC012557.2-201ENST00000605919 418 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 MTND4P12-201ENST00000498999 1377 ntBASIC1.43□□□□□ -2.18
VMP1Q96GC9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VMP1Q96GC9 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 Y_RNA.135-201ENST00000363439 95 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 RNU6-727P-201ENST00000363592 107 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 Y_RNA.212-201ENST00000364177 102 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 SNORD116-11-201ENST00000383882 92 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 Y_RNA.402-201ENST00000383972 102 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 RNU6-17P-201ENST00000384245 107 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 RNU6-18P-201ENST00000384527 107 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VMP1Q96GC9 RNU6-159P-201ENST00000391080 106 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 RPL30P16-201ENST00000419341 429 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AL445305.1-201ENST00000432577 575 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.42□□□□□ -2.18
VMP1Q96GC9 RN7SKP88-201ENST00000516847 250 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AP003033.1-201ENST00000527244 415 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AC022432.1-201ENST00000595739 310 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AC022217.4-201ENST00000604389 163 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 7SK.8-201ENST00000612110 250 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 7SK.11-201ENST00000615477 250 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AC009248.2-201ENST00000619826 254 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 MIR8054-201ENST00000620877 86 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 7SK.13-201ENST00000622040 250 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 AC024614.3-201ENST00000637860 256 ntBASIC1.42□□□□□ -2.18
VMP1Q96GC9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
VMP1Q96GC9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VMP1Q96GC9 Y_RNA.9-201ENST00000362354 101 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 RNU6-793P-201ENST00000384233 104 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 Y_RNA.554-201ENST00000384672 102 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 RNU6-373P-201ENST00000411247 98 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 AC005002.2-201ENST00000438228 269 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 PGBD4P5-201ENST00000445958 426 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 RPL30P10-201ENST00000488148 337 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 SNORA31.10-201ENST00000516482 106 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 MIR5696-201ENST00000578474 85 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 MIR4273-201ENST00000582824 84 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 U6.73-201ENST00000619194 103 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 AC099654.5-201ENST00000636479 350 ntBASIC1.41□□□□□ -2.18
VMP1Q96GC9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
VMP1Q96GC9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
VMP1Q96GC9 Y_RNA.3-201ENST00000362331 103 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 RNY4P14-201ENST00000363656 96 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 277.6 ms