Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-397P-201ENST00000516226 104 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 SNORA40.15-201ENST00000516884 107 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 MIR4753-201ENST00000585119 83 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 SNORD31B-201ENST00000364977 69 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RNU6-611P-201ENST00000384276 104 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AC073910.1-201ENST00000445047 438 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 HMGN2P18-201ENST00000450680 270 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RNU6-625P-201ENST00000459412 107 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AC114982.1-201ENST00000469402 321 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 ATP5EP1-201ENST00000510257 156 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RNU6-408P-201ENST00000515910 100 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RNU6-107P-201ENST00000516643 102 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 RAC1P9-201ENST00000604990 392 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AL162730.1-201ENST00000605734 292 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AL357075.2-201ENST00000614906 189 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 MIR6873-201ENST00000622788 63 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 AC008873.1-201ENST00000625051 138 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
TRIM43Q96BQ3 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 RNU6-545P-201ENST00000362681 104 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 SNORD87-201ENST00000364849 89 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 MIR586-201ENST00000385035 97 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 MIR1283-1-201ENST00000408494 87 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 MTATP8P1-201ENST00000467115 207 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AC010655.3-201ENST00000478818 450 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 RNU6-1046P-201ENST00000516538 107 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AC018448.1-201ENST00000552843 316 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AC233702.2-202ENST00000562547 291 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM43Q96BQ3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 SNORA64-201ENST00000384674 134 ntBASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 AL117187.1-201ENST00000555482 181 ntBASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM43Q96BQ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 RNU6-1309P-201ENST00000363305 108 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 RNA5SP504-201ENST00000410676 117 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 AL137159.1-201ENST00000452808 512 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 RNU6-635P-201ENST00000516651 102 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 RNU6-897P-201ENST00000517135 105 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 AC008269.2-201ENST00000561915 1105 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 MIR7111-201ENST00000619751 72 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
TRIM43Q96BQ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 U3.8-201ENST00000363675 217 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 SNORA67.2-201ENST00000384300 149 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 SNORA67.3-201ENST00000384366 140 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNU2-48P-201ENST00000410694 191 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNU6-130P-201ENST00000411112 103 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 AC016925.1-201ENST00000458303 298 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RPL23AP42-201ENST00000471152 471 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 HMGN2P9-201ENST00000476875 229 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RPL26P26-201ENST00000480251 434 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNU6-1143P-201ENST00000516125 104 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.58□□□□□ -2
TRIM43Q96BQ3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
TRIM43Q96BQ3 PRR13P7-201ENST00000605538 430 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms