Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COPB1P53618 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.74■□□□□ 0.91
COPB1P53618 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.74■□□□□ 0.91
COPB1P53618 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB1P53618 MTDHP1-201ENST00000605323 784 ntBASIC20.74■□□□□ 0.91
COPB1P53618 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
COPB1P53618 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB1P53618 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB1P53618 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COPB1P53618 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB1P53618 AC126763.1-201ENST00000552015 2118 ntBASIC20.74■□□□□ 0.91
COPB1P53618 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.73■□□□□ 0.91
COPB1P53618 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COPB1P53618 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB1P53618 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COPB1P53618 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
COPB1P53618 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB1P53618 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.73■□□□□ 0.91
COPB1P53618 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.73■□□□□ 0.91
COPB1P53618 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.73■□□□□ 0.91
COPB1P53618 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB1P53618 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.73■□□□□ 0.91
COPB1P53618 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB1P53618 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COPB1P53618 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
COPB1P53618 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPB1P53618 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
COPB1P53618 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COPB1P53618 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.72■□□□□ 0.91
COPB1P53618 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 ID1-201ENST00000376105 1233 ntBASIC20.72■□□□□ 0.91
COPB1P53618 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB1P53618 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COPB1P53618 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB1P53618 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COPB1P53618 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.72■□□□□ 0.91
COPB1P53618 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB1P53618 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.72■□□□□ 0.91
COPB1P53618 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 AC233263.1-201ENST00000578059 224 ntBASIC20.72■□□□□ 0.91
COPB1P53618 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.72■□□□□ 0.91
COPB1P53618 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 AC069544.1-201ENST00000609399 999 ntBASIC20.72■□□□□ 0.91
COPB1P53618 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB1P53618 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COPB1P53618 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 NOC2LP1-202ENST00000452600 2235 ntBASIC20.72■□□□□ 0.91
COPB1P53618 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB1P53618 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
COPB1P53618 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.71■□□□□ 0.91
COPB1P53618 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COPB1P53618 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COPB1P53618 HEIH-201ENST00000623091 1652 ntBASIC20.71■□□□□ 0.91
COPB1P53618 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.71■□□□□ 0.91
COPB1P53618 LETM1P2-201ENST00000597330 2178 ntBASIC20.71■□□□□ 0.91
COPB1P53618 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.71■□□□□ 0.91
COPB1P53618 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COPB1P53618 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.71■□□□□ 0.91
COPB1P53618 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.71■□□□□ 0.91
COPB1P53618 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.71■□□□□ 0.91
COPB1P53618 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB1P53618 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms