Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SFTPBP07988 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SFTPBP07988 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.44■□□□□ 0.22
SFTPBP07988 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.44■□□□□ 0.22
SFTPBP07988 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.44■□□□□ 0.22
SFTPBP07988 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.44■□□□□ 0.22
SFTPBP07988 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.44■□□□□ 0.22
SFTPBP07988 RPPH1-201ENST00000516869 333 ntBASIC16.44■□□□□ 0.22
SFTPBP07988 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 RN7SL471P-201ENST00000580476 299 ntBASIC16.44■□□□□ 0.22
SFTPBP07988 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.44■□□□□ 0.22
SFTPBP07988 FAM197Y4-202ENST00000622692 608 ntBASIC16.44■□□□□ 0.22
SFTPBP07988 SDHAP1-207ENST00000440850 2000 ntBASIC16.44■□□□□ 0.22
SFTPBP07988 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SFTPBP07988 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 AC104417.2-201ENST00000562989 1793 ntBASIC16.43■□□□□ 0.22
SFTPBP07988 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.43■□□□□ 0.22
SFTPBP07988 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.43■□□□□ 0.22
SFTPBP07988 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 KRT8P8-201ENST00000434750 1448 ntBASIC16.43■□□□□ 0.22
SFTPBP07988 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SFTPBP07988 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SFTPBP07988 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SFTPBP07988 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SFTPBP07988 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
SFTPBP07988 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTPBP07988 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTPBP07988 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SFTPBP07988 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTPBP07988 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.42■□□□□ 0.22
SFTPBP07988 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.42■□□□□ 0.22
SFTPBP07988 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.42■□□□□ 0.22
SFTPBP07988 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.42■□□□□ 0.22
SFTPBP07988 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.42■□□□□ 0.22
SFTPBP07988 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
SFTPBP07988 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
SFTPBP07988 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SFTPBP07988 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SFTPBP07988 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.41■□□□□ 0.22
SFTPBP07988 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.41■□□□□ 0.22
SFTPBP07988 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTPBP07988 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms