Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR5696-201ENST00000578474 85 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR5006-201ENST00000583027 110 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR7111-201ENST00000619751 72 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU4-9P-201ENST00000364951 139 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-596P-201ENST00000365395 98 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 SNORA67.2-201ENST00000384300 149 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 FGF7P6-202ENST00000451282 293 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC097473.1-201ENST00000508142 408 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC067942.3-201ENST00000512025 362 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 ACA59.1-201ENST00000515966 143 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU4-49P-201ENST00000516080 140 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-566P-201ENST00000516790 107 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-856P-201ENST00000516959 98 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 SNORA59B-202ENST00000578183 701 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AC009248.2-201ENST00000619826 254 ntBASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.29□□□□□ -2.2
CDC42EP4Q9H3Q1 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-418P-201ENST00000384035 107 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 AC243428.1-201ENST00000421099 264 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 MTND4LP16-201ENST00000440828 295 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 RNA5SP57-201ENST00000459463 123 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-329P-201ENST00000459618 107 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 HMGN2P9-201ENST00000476875 229 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 AF235103.2-201ENST00000525753 346 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 RRN3P3-201ENST00000549207 578 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 SNRPGP20-201ENST00000604477 205 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 AC098679.4-201ENST00000624241 654 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 MTND4P5-201ENST00000435821 1374 ntBASIC1.28□□□□□ -2.2
CDC42EP4Q9H3Q1 ZNF204P-201ENST00000416749 2397 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AC027514.1-201ENST00000588561 1603 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-112P-201ENST00000363599 104 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.505-201ENST00000384489 102 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR32-201ENST00000384965 70 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR586-201ENST00000385035 97 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AL117342.1-201ENST00000404861 406 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 RPL30P16-201ENST00000419341 429 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 MTATP6P13-201ENST00000438531 667 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 NFU1P2-201ENST00000448700 469 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AC027288.2-201ENST00000553028 243 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR4742-201ENST00000581069 85 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AC060780.3-201ENST00000589464 80 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AP003465.2-201ENST00000602571 373 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AL359697.1-201ENST00000624879 587 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AC008873.1-201ENST00000625051 138 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 AL133216.2-202ENST00000634512 349 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
CDC42EP4Q9H3Q1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-17P-201ENST00000384245 107 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-842P-201ENST00000384269 107 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-975P-201ENST00000384296 105 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-18P-201ENST00000384527 107 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNA5SP504-201ENST00000410676 117 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AC060773.1-201ENST00000421698 310 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms