Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC1Q15915 AL445305.1-201ENST00000432577 575 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 HMGB1P18-201ENST00000438801 619 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 RN7SKP210-201ENST00000459176 261 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 HMGN2P9-201ENST00000476875 229 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 RNU2-34P-201ENST00000516534 121 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 RNU6-344P-201ENST00000516635 111 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 SUMO2P18-201ENST00000518873 252 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC1Q15915 AL590705.4-201ENST00000532209 134 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 CBX3P8-201ENST00000532412 525 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 GNAI2P1-201ENST00000541815 315 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 AC022254.1-201ENST00000567857 235 ntBASIC1.54□□□□□ -2.16
ZIC1Q15915 RNU6-873P-201ENST00000363833 107 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.405-201ENST00000383979 100 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.451-201ENST00000384200 100 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RNU6-975P-201ENST00000384296 105 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.490-201ENST00000384413 102 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.524-201ENST00000384564 100 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.561-201ENST00000384694 100 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 MIR586-201ENST00000385035 97 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 AL033519.2-201ENST00000403958 392 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.594-201ENST00000410373 140 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RNU6-1050P-201ENST00000410388 107 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RNA5SP100-201ENST00000410903 110 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RNA5SP59-201ENST00000410922 110 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RN7SKP101-201ENST00000411376 320 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RPL37P10-201ENST00000412884 288 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 RPL21P111-201ENST00000418453 477 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 MTCO3P29-201ENST00000432119 779 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 AC016717.1-201ENST00000448918 286 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 AC114982.1-201ENST00000469402 321 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.53□□□□□ -2.16
ZIC1Q15915 SUB1P4-201ENST00000566062 339 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 AP000942.3-201ENST00000603702 160 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 uc_338.5-201ENST00000611839 155 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.53□□□□□ -2.16
ZIC1Q15915 Y_RNA.2-201ENST00000362330 96 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 Y_RNA.88-201ENST00000363029 99 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 RNU6-601P-201ENST00000384540 107 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 RNU6-1235P-201ENST00000384559 107 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 RNU6-159P-201ENST00000391080 106 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 RNA5SP504-201ENST00000410676 117 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 AC060773.1-201ENST00000421698 310 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 USMG5P1-201ENST00000425964 177 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 AC099677.2-201ENST00000436385 175 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 AC074290.1-201ENST00000448883 135 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 ATP5J2P3-201ENST00000451550 258 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 RNU6-498P-201ENST00000459468 107 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 PRDX4P1-201ENST00000507189 574 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 Y_RNA.670-201ENST00000516255 105 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 RNU6-948P-201ENST00000516374 107 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 SNORA25.14-201ENST00000516481 132 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 Y_RNA.708-201ENST00000516950 96 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 AC134698.4-201ENST00000523451 826 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC1Q15915 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC1Q15915 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC1Q15915 UBL5P4-201ENST00000562584 236 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC1Q15915 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC1Q15915 AC008873.1-201ENST00000625051 138 ntBASIC1.52□□□□□ -2.17
ZIC1Q15915 MTND4P12-201ENST00000498999 1377 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 RNU1-62P-201ENST00000362599 164 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 Y_RNA.166-201ENST00000363730 102 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 Y_RNA.482-201ENST00000384377 111 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 RNU4-62P-201ENST00000410125 130 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.51□□□□□ -2.17
ZIC1Q15915 PDCL2P1-201ENST00000419302 352 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 RBMX2P4-201ENST00000441256 376 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.51□□□□□ -2.17
ZIC1Q15915 AP000870.1-201ENST00000472927 406 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AC010409.1-201ENST00000487382 476 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AC103851.1-201ENST00000506833 274 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 RNU6-1041P-201ENST00000516254 102 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 RNU1-117P-201ENST00000517041 158 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 SNORD11B-201ENST00000607707 90 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AC005014.2-201ENST00000607795 599 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AC009229.3-201ENST00000608056 282 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 AL078596.1-201ENST00000624856 447 ntBASIC1.51□□□□□ -2.17
ZIC1Q15915 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
ZIC1Q15915 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ZIC1Q15915 RNU6-862P-201ENST00000362804 105 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 RNU5F-3P-201ENST00000363767 117 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
ZIC1Q15915 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 NCOR1P3-201ENST00000420479 303 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 MTND3P10-201ENST00000450967 341 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 RNU7-57P-201ENST00000459540 60 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZIC1Q15915 AC011406.1-201ENST00000512440 370 ntBASIC1.5□□□□□ -2.17
ZIC1Q15915 RNA5SP458-201ENST00000516188 119 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms