Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AC010154.1-201ENST00000425857 269 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 AC073415.1-201ENST00000449240 153 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 MTND1P27-201ENST00000451117 902 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 MTCO2P18-201ENST00000457151 658 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 TRBVA-201ENST00000498804 316 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 SCARNA16.2-201ENST00000516520 172 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 MIR4424-201ENST00000585257 86 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 AC024933.1-201ENST00000608472 348 ntBASIC0.87□□□□□ -2.27
BPIFA3Q9BQP9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNU4-79P-201ENST00000362764 141 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 Y_RNA.159-201ENST00000363674 87 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-1329P-201ENST00000365664 107 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 MRPL42P3-201ENST00000401492 326 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-321P-201ENST00000410912 106 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 MTCYBP8-201ENST00000422855 651 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 COX6CP14-201ENST00000469580 174 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-1053P-201ENST00000515930 101 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-189P-201ENST00000516120 101 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RN7SKP287-201ENST00000516546 266 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 MIR3124-201ENST00000582636 67 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC004223.2-201ENST00000590309 544 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC022217.4-201ENST00000604389 163 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC093424.1-201ENST00000604999 338 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC097065.2-201ENST00000608159 533 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC064836.2-201ENST00000609491 462 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 GHRLOS.1-201ENST00000610995 70 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 AC103705.1-201ENST00000619013 241 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 SCARNA4-201ENST00000629045 128 ntBASIC0.86□□□□□ -2.27
BPIFA3Q9BQP9 RNA5SP432-201ENST00000362480 116 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 Y_RNA.123-201ENST00000363338 102 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AL049545.1-201ENST00000401856 572 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AL606923.1-201ENST00000406616 190 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AC016909.1-201ENST00000415916 166 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AL606517.2-201ENST00000442855 241 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AC005840.1-201ENST00000498412 377 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 RNA5SP54-201ENST00000516951 92 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 AC060788.1-201ENST00000521318 469 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 CBX3P8-201ENST00000532412 525 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 Z94722.1-201ENST00000604328 474 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 BNIP3P10-201ENST00000605360 577 ntBASIC0.85□□□□□ -2.27
BPIFA3Q9BQP9 MIR337-201ENST00000362281 93 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-1317P-201ENST00000364582 104 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-245P-201ENST00000384020 107 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-910P-201ENST00000390844 107 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-440P-201ENST00000390882 105 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 TIMM9P3-201ENST00000428659 274 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU7-94P-201ENST00000459576 63 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 CCDC34P1-201ENST00000507441 517 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 RNU6-430P-201ENST00000517078 107 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 MRPS36P4-201ENST00000534436 298 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 AC073349.3-201ENST00000617616 186 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 OR5AK4P-201ENST00000635912 903 ntBASIC0.84□□□□□ -2.27
BPIFA3Q9BQP9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
BPIFA3Q9BQP9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 OR4G1P-203ENST00000641984 1631 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-1080P-201ENST00000383982 107 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-784P-201ENST00000384330 106 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 AC245047.3-201ENST00000429428 127 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 NDUFB4P10-201ENST00000452541 359 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 AL137100.2-201ENST00000555786 315 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 MIR5695-201ENST00000579717 85 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 MIR8076-201ENST00000611401 83 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 SNORD3E-202ENST00000627253 216 ntBASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 FER-210ENST00000628534 558 ntTSL 5 BASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
BPIFA3Q9BQP9 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-1103P-201ENST00000384150 107 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 MIR653-201ENST00000385279 96 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AL358934.1-201ENST00000432346 324 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AC245047.7-201ENST00000440265 293 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 TPTE2P5-203ENST00000458118 728 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 369.5 ms