Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AL356867.1-201ENST00000429623 299 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC009237.7-201ENST00000447357 229 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 RPL23AP3-201ENST00000453844 468 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 MED28P2-201ENST00000475771 317 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 RN7SL499P-201ENST00000481141 276 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 RPL23AP49-201ENST00000492925 468 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 UBL5P4-201ENST00000562584 236 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 MIR4423-201ENST00000580922 80 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 SNORD84-203ENST00000584275 78 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 MIR6766-201ENST00000622641 72 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 SCARNA4-201ENST00000629045 128 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 U2.21-201ENST00000637295 81 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC233981.2-201ENST00000611524 1614 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC009541.1-201ENST00000438279 2662 ntBASIC2.65□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 SNORA36A-201ENST00000384221 132 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 U8.10-201ENST00000384260 133 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 SNORD78.2-201ENST00000391076 69 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AL591034.1-201ENST00000407447 340 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 RNU2-68P-201ENST00000410878 191 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.65□□□□□ -1.99
SNHG28P0DPA3 SNRPEP9-201ENST00000436794 238 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.65□□□□□ -1.99
SNHG28P0DPA3 SNORA31.8-201ENST00000516327 108 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AC027288.2-201ENST00000553028 243 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 RPL21P9-201ENST00000556149 474 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 TRAV28-201ENST00000557548 323 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AC105137.2-201ENST00000569073 466 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AC020895.1-201ENST00000595362 272 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AL357075.2-201ENST00000614906 189 ntBASIC2.65□□□□□ -1.99
SNHG28P0DPA3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.65□□□□□ -1.99
SNHG28P0DPA3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RNU4-9P-201ENST00000364951 139 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RNU6-898P-201ENST00000365627 104 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RNU1-73P-201ENST00000383971 164 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 SNORA29-201ENST00000384183 140 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 SNORA70B-201ENST00000384210 135 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RNU6-804P-201ENST00000384286 107 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR10B-201ENST00000385011 110 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RNU6-918P-201ENST00000391219 106 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RNA5SP425-201ENST00000410336 112 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 RN7SKP192-201ENST00000411291 327 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AL135786.1-201ENST00000415892 214 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AC092047.1-201ENST00000424997 240 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR2355-201ENST00000517199 87 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR1273D-201ENST00000577266 86 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR3921-201ENST00000577308 85 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR4282-201ENST00000583613 67 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.64□□□□□ -1.99
SNHG28P0DPA3 AC132825.6-201ENST00000638861 357 ntBASIC2.64□□□□□ -1.99
SNHG28P0DPA3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNHG28P0DPA3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SNHG28P0DPA3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SNHG28P0DPA3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNHG28P0DPA3 RNU4-90P-201ENST00000362773 141 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 RNU6-879P-201ENST00000364328 108 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 RNA5SP240-201ENST00000365355 128 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 RNU6-281P-201ENST00000384212 103 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 SNORD12B-201ENST00000410433 91 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.63□□□□□ -1.99
SNHG28P0DPA3 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 WARS2P1-201ENST00000429678 537 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 AP000705.1-201ENST00000454567 350 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 AC087477.1-201ENST00000465747 340 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 TRBV12-1-201ENST00000479785 344 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.63□□□□□ -1.99
SNHG28P0DPA3 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 AL365265.1-201ENST00000621045 234 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 U6.99-201ENST00000637524 83 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 MAPK10-322ENST00000641485 4530 ntBASIC2.63□□□□□ -1.99
SNHG28P0DPA3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.63□□□□□ -1.99
SNHG28P0DPA3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.63□□□□□ -1.99
SNHG28P0DPA3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SNHG28P0DPA3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.62□□□□□ -1.99
SNHG28P0DPA3 RNU6-858P-201ENST00000362436 107 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms