Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORA67.3-201ENST00000384366 140 ntBASIC2.47□□□□□ -2.01
MMP3P08254 RNU6-541P-201ENST00000384709 110 ntBASIC2.47□□□□□ -2.01
MMP3P08254 MIR628-201ENST00000385229 95 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AL023284.1-201ENST00000403956 276 ntBASIC2.47□□□□□ -2.01
MMP3P08254 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MMP3P08254 MTCYBP2-201ENST00000407745 171 ntBASIC2.47□□□□□ -2.01
MMP3P08254 USP9YP16-201ENST00000430287 407 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.47□□□□□ -2.01
MMP3P08254 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.47□□□□□ -2.01
MMP3P08254 USP9YP23-201ENST00000455085 407 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AC022868.1-201ENST00000517767 391 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.47□□□□□ -2.01
MMP3P08254 MIR5695-201ENST00000579717 85 ntBASIC2.47□□□□□ -2.01
MMP3P08254 MIR5188-201ENST00000583467 113 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AC006504.6-201ENST00000590142 199 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AL713866.2-201ENST00000603579 219 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AC016727.2-201ENST00000603988 621 ntBASIC2.47□□□□□ -2.01
MMP3P08254 AC104695.3-201ENST00000604052 296 ntBASIC2.47□□□□□ -2.01
MMP3P08254 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.47□□□□□ -2.01
MMP3P08254 U2.1-201ENST00000618978 145 ntBASIC2.47□□□□□ -2.01
MMP3P08254 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.47□□□□□ -2.01
MMP3P08254 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
MMP3P08254 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
MMP3P08254 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
MMP3P08254 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MMP3P08254 SNORA63C-201ENST00000364578 129 ntBASIC2.46□□□□□ -2.02
MMP3P08254 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
MMP3P08254 RNU6-1274P-201ENST00000384557 107 ntBASIC2.46□□□□□ -2.02
MMP3P08254 SNORA11.4-201ENST00000408823 129 ntBASIC2.46□□□□□ -2.02
MMP3P08254 RNA5SP201-201ENST00000410316 124 ntBASIC2.46□□□□□ -2.02
MMP3P08254 HMGB3P2-201ENST00000411913 584 ntBASIC2.46□□□□□ -2.02
MMP3P08254 AC114482.1-201ENST00000418010 247 ntBASIC2.46□□□□□ -2.02
MMP3P08254 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MMP3P08254 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.46□□□□□ -2.02
MMP3P08254 WARS2P1-201ENST00000429678 537 ntBASIC2.46□□□□□ -2.02
MMP3P08254 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.46□□□□□ -2.02
MMP3P08254 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
MMP3P08254 RNU6-567P-201ENST00000516746 107 ntBASIC2.46□□□□□ -2.02
MMP3P08254 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
MMP3P08254 AC144568.1-201ENST00000520139 137 ntBASIC2.46□□□□□ -2.02
MMP3P08254 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
MMP3P08254 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MMP3P08254 ZNF204P-201ENST00000416749 2397 ntBASIC2.46□□□□□ -2.02
MMP3P08254 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.02
MMP3P08254 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MMP3P08254 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MMP3P08254 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
MMP3P08254 RNA5SP361-201ENST00000362686 118 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6-1159P-201ENST00000362933 107 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6-944P-201ENST00000364023 107 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU1-138P-201ENST00000384093 164 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6-1160P-201ENST00000384546 104 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6-220P-201ENST00000390919 107 ntBASIC2.45□□□□□ -2.02
MMP3P08254 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
MMP3P08254 MIR449C-201ENST00000516047 92 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6-327P-201ENST00000516270 127 ntBASIC2.45□□□□□ -2.02
MMP3P08254 SCARNA16.3-201ENST00000516595 184 ntBASIC2.45□□□□□ -2.02
MMP3P08254 RNU6-58P-201ENST00000517143 103 ntBASIC2.45□□□□□ -2.02
MMP3P08254 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.45□□□□□ -2.02
MMP3P08254 AC090617.3-201ENST00000573670 475 ntBASIC2.45□□□□□ -2.02
MMP3P08254 MIR5194-201ENST00000582634 120 ntBASIC2.45□□□□□ -2.02
MMP3P08254 MIR3117-201ENST00000584034 78 ntBASIC2.45□□□□□ -2.02
MMP3P08254 AC069294.1-201ENST00000608397 350 ntBASIC2.45□□□□□ -2.02
MMP3P08254 PCGEM1.1-201ENST00000613431 131 ntBASIC2.45□□□□□ -2.02
MMP3P08254 AL353997.5-201ENST00000618886 171 ntBASIC2.45□□□□□ -2.02
MMP3P08254 AL162373.1-201ENST00000620433 407 ntBASIC2.45□□□□□ -2.02
MMP3P08254 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
MMP3P08254 MIR219B-201ENST00000637023 88 ntBASIC2.45□□□□□ -2.02
MMP3P08254 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
MMP3P08254 AC010329.5-201ENST00000623497 2174 ntBASIC2.44□□□□□ -2.02
MMP3P08254 Y_RNA.158-201ENST00000363651 101 ntBASIC2.44□□□□□ -2.02
MMP3P08254 RNU6-873P-201ENST00000363833 107 ntBASIC2.44□□□□□ -2.02
MMP3P08254 Y_RNA.389-201ENST00000383924 113 ntBASIC2.44□□□□□ -2.02
MMP3P08254 RNU6-26P-201ENST00000383985 107 ntBASIC2.44□□□□□ -2.02
MMP3P08254 MIR10B-201ENST00000385011 110 ntBASIC2.44□□□□□ -2.02
MMP3P08254 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.44□□□□□ -2.02
MMP3P08254 AL590556.1-201ENST00000423231 483 ntBASIC2.44□□□□□ -2.02
MMP3P08254 MICF-203ENST00000432679 129 ntBASIC2.44□□□□□ -2.02
MMP3P08254 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.44□□□□□ -2.02
MMP3P08254 AC112492.4-201ENST00000456549 352 ntBASIC2.44□□□□□ -2.02
MMP3P08254 AC107032.1-201ENST00000485945 480 ntBASIC2.44□□□□□ -2.02
MMP3P08254 AC132942.1-201ENST00000486753 483 ntBASIC2.44□□□□□ -2.02
MMP3P08254 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.44□□□□□ -2.02
MMP3P08254 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.44□□□□□ -2.02
MMP3P08254 RNU6-1046P-201ENST00000516538 107 ntBASIC2.44□□□□□ -2.02
MMP3P08254 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.44□□□□□ -2.02
MMP3P08254 DEFB131C-201ENST00000528817 165 ntBASIC2.44□□□□□ -2.02
MMP3P08254 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.44□□□□□ -2.02
MMP3P08254 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.44□□□□□ -2.02
MMP3P08254 AL049779.4-201ENST00000604500 156 ntBASIC2.44□□□□□ -2.02
MMP3P08254 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.44□□□□□ -2.02
MMP3P08254 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.44□□□□□ -2.02
MMP3P08254 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.44□□□□□ -2.02
MMP3P08254 MIR6132-201ENST00000622083 109 ntBASIC2.44□□□□□ -2.02
MMP3P08254 MIR7157-201ENST00000635801 60 ntBASIC2.44□□□□□ -2.02
MMP3P08254 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.44□□□□□ -2.02
MMP3P08254 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.44□□□□□ -2.02
MMP3P08254 RNU6-879P-201ENST00000364328 108 ntBASIC2.43□□□□□ -2.02
MMP3P08254 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 239.8 ms