Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.59□□□□□ -1.99
SMAD6O43541 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.59□□□□□ -1.99
SMAD6O43541 MIR4643-201ENST00000577473 78 ntBASIC2.59□□□□□ -1.99
SMAD6O43541 RMST_6.1-201ENST00000611980 203 ntBASIC2.59□□□□□ -1.99
SMAD6O43541 AC004792.1-201ENST00000614523 137 ntBASIC2.59□□□□□ -1.99
SMAD6O43541 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.59□□□□□ -1.99
SMAD6O43541 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
SMAD6O43541 SNORD56.1-201ENST00000362913 68 ntBASIC2.58□□□□□ -2
SMAD6O43541 RNU6-884P-201ENST00000363889 107 ntBASIC2.58□□□□□ -2
SMAD6O43541 SNORD115-32-201ENST00000364079 82 ntBASIC2.58□□□□□ -2
SMAD6O43541 RNU6-879P-201ENST00000364328 108 ntBASIC2.58□□□□□ -2
SMAD6O43541 SNORD32A-201ENST00000364805 84 ntBASIC2.58□□□□□ -2
SMAD6O43541 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
SMAD6O43541 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
SMAD6O43541 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
SMAD6O43541 RNA5SP213-201ENST00000391031 106 ntBASIC2.58□□□□□ -2
SMAD6O43541 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.58□□□□□ -2
SMAD6O43541 RNU6-1245P-201ENST00000411130 106 ntBASIC2.58□□□□□ -2
SMAD6O43541 RPL26P27-201ENST00000414397 437 ntBASIC2.58□□□□□ -2
SMAD6O43541 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.58□□□□□ -2
SMAD6O43541 EIF1AXP1-201ENST00000419267 435 ntBASIC2.58□□□□□ -2
SMAD6O43541 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
SMAD6O43541 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.58□□□□□ -2
SMAD6O43541 AC087477.1-201ENST00000465747 340 ntBASIC2.58□□□□□ -2
SMAD6O43541 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.58□□□□□ -2
SMAD6O43541 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
SMAD6O43541 AC025281.1-201ENST00000567026 265 ntBASIC2.58□□□□□ -2
SMAD6O43541 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
SMAD6O43541 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
SMAD6O43541 U2.14-201ENST00000615943 113 ntBASIC2.58□□□□□ -2
SMAD6O43541 SNORA43.4-201ENST00000629559 138 ntBASIC2.58□□□□□ -2
SMAD6O43541 IGHVIII-44-202ENST00000636235 289 ntBASIC2.58□□□□□ -2
SMAD6O43541 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMAD6O43541 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.58□□□□□ -2
SMAD6O43541 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMAD6O43541 RNA5SP361-201ENST00000362686 118 ntBASIC2.57□□□□□ -2
SMAD6O43541 Y_RNA.180-201ENST00000363867 113 ntBASIC2.57□□□□□ -2
SMAD6O43541 Y_RNA.200-201ENST00000364018 102 ntBASIC2.57□□□□□ -2
SMAD6O43541 RNU6-290P-201ENST00000365212 101 ntBASIC2.57□□□□□ -2
SMAD6O43541 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
SMAD6O43541 SNORA29-201ENST00000384183 140 ntBASIC2.57□□□□□ -2
SMAD6O43541 MIR518C-201ENST00000384822 101 ntBASIC2.57□□□□□ -2
SMAD6O43541 MIR153-2-201ENST00000385225 87 ntBASIC2.57□□□□□ -2
SMAD6O43541 MIR548M-201ENST00000408260 86 ntBASIC2.57□□□□□ -2
SMAD6O43541 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.57□□□□□ -2
SMAD6O43541 HSPE1P25-201ENST00000455484 251 ntBASIC2.57□□□□□ -2
SMAD6O43541 AL137100.2-201ENST00000555786 315 ntBASIC2.57□□□□□ -2
SMAD6O43541 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.57□□□□□ -2
SMAD6O43541 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.57□□□□□ -2
SMAD6O43541 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.57□□□□□ -2
SMAD6O43541 MIR4513-201ENST00000581077 86 ntBASIC2.57□□□□□ -2
SMAD6O43541 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
SMAD6O43541 MIR6134-201ENST00000617606 109 ntBASIC2.57□□□□□ -2
SMAD6O43541 AC024581.2-201ENST00000619986 252 ntBASIC2.57□□□□□ -2
SMAD6O43541 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
SMAD6O43541 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SMAD6O43541 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.56□□□□□ -2
SMAD6O43541 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SMAD6O43541 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SMAD6O43541 RNU5B-2P-201ENST00000363036 113 ntBASIC2.56□□□□□ -2
SMAD6O43541 SNORA38-201ENST00000363946 132 ntBASIC2.56□□□□□ -2
SMAD6O43541 Y_RNA.270-201ENST00000364693 104 ntBASIC2.56□□□□□ -2
SMAD6O43541 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
SMAD6O43541 MIR487A-201ENST00000385009 80 ntBASIC2.56□□□□□ -2
SMAD6O43541 RNU1-139P-201ENST00000391307 165 ntBASIC2.56□□□□□ -2
SMAD6O43541 FTH1P15-201ENST00000406984 280 ntBASIC2.56□□□□□ -2
SMAD6O43541 MIR1298-201ENST00000408783 112 ntBASIC2.56□□□□□ -2
SMAD6O43541 RPL23AP95-201ENST00000426806 265 ntBASIC2.56□□□□□ -2
SMAD6O43541 AC005002.2-201ENST00000438228 269 ntBASIC2.56□□□□□ -2
SMAD6O43541 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
SMAD6O43541 SERF1AP1-201ENST00000514575 187 ntBASIC2.56□□□□□ -2
SMAD6O43541 RNU6-1114P-201ENST00000516022 107 ntBASIC2.56□□□□□ -2
SMAD6O43541 AC027288.2-201ENST00000553028 243 ntBASIC2.56□□□□□ -2
SMAD6O43541 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
SMAD6O43541 MIR7515-201ENST00000637837 67 ntBASIC2.56□□□□□ -2
SMAD6O43541 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
SMAD6O43541 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMAD6O43541 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.56□□□□□ -2
SMAD6O43541 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMAD6O43541 RNU4-90P-201ENST00000362773 141 ntBASIC2.55□□□□□ -2
SMAD6O43541 Y_RNA.286-201ENST00000364813 102 ntBASIC2.55□□□□□ -2
SMAD6O43541 U8.10-201ENST00000384260 133 ntBASIC2.55□□□□□ -2
SMAD6O43541 Y_RNA.504-201ENST00000384481 104 ntBASIC2.55□□□□□ -2
SMAD6O43541 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
SMAD6O43541 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
SMAD6O43541 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SMAD6O43541 SNORD12B-201ENST00000410433 91 ntBASIC2.55□□□□□ -2
SMAD6O43541 AC074117.2-201ENST00000417130 397 ntBASIC2.55□□□□□ -2
SMAD6O43541 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.55□□□□□ -2
SMAD6O43541 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
SMAD6O43541 AL445305.1-201ENST00000432577 575 ntBASIC2.55□□□□□ -2
SMAD6O43541 AC007969.2-201ENST00000441891 191 ntBASIC2.55□□□□□ -2
SMAD6O43541 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
SMAD6O43541 AL138752.1-201ENST00000452964 351 ntBASIC2.55□□□□□ -2
SMAD6O43541 SNRPGP7-201ENST00000469016 106 ntBASIC2.55□□□□□ -2
SMAD6O43541 MRPL42P6-201ENST00000486397 371 ntBASIC2.55□□□□□ -2
SMAD6O43541 RPS29P20-201ENST00000489592 171 ntBASIC2.55□□□□□ -2
SMAD6O43541 RPS27AP10-201ENST00000496103 208 ntBASIC2.55□□□□□ -2
SMAD6O43541 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.55□□□□□ -2
SMAD6O43541 AL449363.1-201ENST00000617815 186 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms