Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 AP006289.1-201ENST00000538089 277 ntBASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 U7.3-201ENST00000616123 62 ntBASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 MIR5739-201ENST00000619803 80 ntBASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 U3.53-201ENST00000628922 216 ntBASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 SNORA17.5-201ENST00000630429 132 ntBASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 AC012442.3-202ENST00000636742 206 ntBASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP3-1Q9BYR8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP3-1Q9BYR8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC2.34□□□□□ -2.04
KRTAP3-1Q9BYR8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
KRTAP3-1Q9BYR8 MAPK10-253ENST00000641010 4072 ntBASIC2.34□□□□□ -2.04
KRTAP3-1Q9BYR8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC2.34□□□□□ -2.04
KRTAP3-1Q9BYR8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
KRTAP3-1Q9BYR8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC091564.4-201ENST00000533934 2194 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AL136164.3-201ENST00000624429 3978 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-268P-201ENST00000364174 107 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 Y_RNA.221-201ENST00000364248 96 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 Y_RNA.244-201ENST00000364484 109 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 U8.5-201ENST00000364528 136 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU4-16P-201ENST00000364737 141 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-1296P-201ENST00000383879 107 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR515-2-201ENST00000384883 83 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR515-1-201ENST00000384884 83 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR143-201ENST00000385300 106 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP467-201ENST00000391274 118 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 FO393413.1-201ENST00000402892 195 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR1286-201ENST00000408112 78 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-733P-201ENST00000410759 104 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MRPL35P3-201ENST00000421557 364 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AL356387.2-201ENST00000422272 243 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MICF-203ENST00000432679 129 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AL353689.1-201ENST00000438895 199 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 PPIA-203ENST00000451562 544 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 CYP2C59P-201ENST00000457790 269 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RPL35AP15-201ENST00000468042 339 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RPS26P28-201ENST00000470806 348 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC140172.1-201ENST00000502928 141 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 SCARNA22-201ENST00000503991 125 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU1-6P-201ENST00000516290 144 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC091178.1-203ENST00000584586 279 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR4762-201ENST00000585261 75 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 FAM27B-201ENST00000610601 213 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AL353149.1-201ENST00000610667 244 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 UCA1.1-201ENST00000620952 75 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC091905.2-201ENST00000623143 306 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC007546.2-201ENST00000623996 360 ntBASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-1Q9BYR8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 AL138820.1-201ENST00000617901 5305 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP295-201ENST00000362655 121 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-170P-201ENST00000362832 104 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORD115-19-201ENST00000363098 82 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORD115-18-201ENST00000363293 82 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-832P-201ENST00000363319 107 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORD115-17-201ENST00000364612 82 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORA14A-201ENST00000364773 135 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 Y_RNA.336-201ENST00000365307 109 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP22-201ENST00000365393 109 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 Y_RNA.360-201ENST00000365512 102 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-409P-201ENST00000384114 104 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU1-106P-201ENST00000384382 164 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-644P-201ENST00000391155 98 ntBASIC2.32□□□□□ -2.04
KRTAP3-1Q9BYR8 RPL37P18-201ENST00000411602 243 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms