Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 Y_RNA.560-201ENST00000384689 102 ntBASIC0.72□□□□□ -2.29
SOD1P00441 MIR515-2-201ENST00000384883 83 ntBASIC0.72□□□□□ -2.29
SOD1P00441 MIR515-1-201ENST00000384884 83 ntBASIC0.72□□□□□ -2.29
SOD1P00441 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.72□□□□□ -2.29
SOD1P00441 COX6CP10-201ENST00000416832 224 ntBASIC0.72□□□□□ -2.29
SOD1P00441 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.72□□□□□ -2.29
SOD1P00441 AC133104.1-201ENST00000429100 218 ntBASIC0.72□□□□□ -2.29
SOD1P00441 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.72□□□□□ -2.29
SOD1P00441 PGBD4P5-201ENST00000445958 426 ntBASIC0.72□□□□□ -2.29
SOD1P00441 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.72□□□□□ -2.29
SOD1P00441 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.72□□□□□ -2.29
SOD1P00441 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SOD1P00441 AC105417.1-201ENST00000514691 285 ntBASIC0.72□□□□□ -2.29
SOD1P00441 RNU6-948P-201ENST00000516374 107 ntBASIC0.72□□□□□ -2.29
SOD1P00441 MIR4709-201ENST00000577272 72 ntBASIC0.72□□□□□ -2.29
SOD1P00441 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
SOD1P00441 AC234772.3-201ENST00000602277 528 ntBASIC0.72□□□□□ -2.29
SOD1P00441 Z84480.1-201ENST00000605131 311 ntBASIC0.72□□□□□ -2.29
SOD1P00441 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.72□□□□□ -2.29
SOD1P00441 snoU2-30.2-201ENST00000362805 70 ntBASIC0.71□□□□□ -2.3
SOD1P00441 Y_RNA.796-201ENST00000364268 102 ntBASIC0.71□□□□□ -2.3
SOD1P00441 Y_RNA.799-201ENST00000364992 102 ntBASIC0.71□□□□□ -2.3
SOD1P00441 RNU6-975P-201ENST00000384296 105 ntBASIC0.71□□□□□ -2.3
SOD1P00441 RNU6-331P-201ENST00000384724 107 ntBASIC0.71□□□□□ -2.3
SOD1P00441 RNU6-1093P-201ENST00000391194 107 ntBASIC0.71□□□□□ -2.3
SOD1P00441 RNU6-903P-201ENST00000391270 109 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.71□□□□□ -2.3
SOD1P00441 PIGFP2-201ENST00000421400 651 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.71□□□□□ -2.3
SOD1P00441 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.71□□□□□ -2.3
SOD1P00441 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.71□□□□□ -2.3
SOD1P00441 AL356010.1-201ENST00000456364 102 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC114982.1-201ENST00000469402 321 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AL163195.1-201ENST00000496941 348 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC091435.1-201ENST00000505442 584 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.71□□□□□ -2.3
SOD1P00441 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC024995.1-201ENST00000523014 93 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AP002963.1-201ENST00000530590 184 ntBASIC0.71□□□□□ -2.3
SOD1P00441 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.71□□□□□ -2.3
SOD1P00441 AC016957.1-201ENST00000534895 309 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC026470.2-201ENST00000561492 181 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.71□□□□□ -2.3
SOD1P00441 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.71□□□□□ -2.3
SOD1P00441 AC136932.1-201ENST00000574771 208 ntBASIC0.71□□□□□ -2.3
SOD1P00441 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC027449.1-201ENST00000608890 407 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC040896.1-201ENST00000613819 479 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC122133.1-201ENST00000613964 233 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC022709.1-201ENST00000615967 87 ntBASIC0.71□□□□□ -2.3
SOD1P00441 AC012676.2-201ENST00000619258 186 ntBASIC0.71□□□□□ -2.3
SOD1P00441 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.71□□□□□ -2.3
SOD1P00441 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SOD1P00441 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SOD1P00441 RNU5B-2P-201ENST00000363036 113 ntBASIC0.7□□□□□ -2.3
SOD1P00441 RNU6-181P-201ENST00000363225 107 ntBASIC0.7□□□□□ -2.3
SOD1P00441 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
SOD1P00441 SNORA25-201ENST00000384384 134 ntBASIC0.7□□□□□ -2.3
SOD1P00441 Y_RNA.508-201ENST00000384502 114 ntBASIC0.7□□□□□ -2.3
SOD1P00441 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SOD1P00441 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
SOD1P00441 AC090960.1-201ENST00000421072 306 ntBASIC0.7□□□□□ -2.3
SOD1P00441 HMGN2P34-201ENST00000437647 269 ntBASIC0.7□□□□□ -2.3
SOD1P00441 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.7□□□□□ -2.3
SOD1P00441 RPS29P27-201ENST00000463711 170 ntBASIC0.7□□□□□ -2.3
SOD1P00441 UBL5P1-201ENST00000507979 193 ntBASIC0.7□□□□□ -2.3
SOD1P00441 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.7□□□□□ -2.3
SOD1P00441 SNORA18.6-201ENST00000516792 115 ntBASIC0.7□□□□□ -2.3
SOD1P00441 RN7SKP88-201ENST00000516847 250 ntBASIC0.7□□□□□ -2.3
SOD1P00441 RNU6-445P-201ENST00000516949 107 ntBASIC0.7□□□□□ -2.3
SOD1P00441 MIR4753-201ENST00000585119 83 ntBASIC0.7□□□□□ -2.3
SOD1P00441 RNU6-85P-201ENST00000605989 107 ntBASIC0.7□□□□□ -2.3
SOD1P00441 AC104458.1-201ENST00000608243 463 ntBASIC0.7□□□□□ -2.3
SOD1P00441 7SK.8-201ENST00000612110 250 ntBASIC0.7□□□□□ -2.3
SOD1P00441 AL050303.3-201ENST00000613704 284 ntBASIC0.7□□□□□ -2.3
SOD1P00441 TCL6_2.1-201ENST00000615162 119 ntBASIC0.7□□□□□ -2.3
SOD1P00441 7SK.11-201ENST00000615477 250 ntBASIC0.7□□□□□ -2.3
SOD1P00441 AC005562.2-201ENST00000618264 111 ntBASIC0.7□□□□□ -2.3
SOD1P00441 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.7□□□□□ -2.3
SOD1P00441 7SK.13-201ENST00000622040 250 ntBASIC0.7□□□□□ -2.3
SOD1P00441 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
SOD1P00441 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.7□□□□□ -2.3
SOD1P00441 FGF7P2-201ENST00000332473 296 ntBASIC0.69□□□□□ -2.3
SOD1P00441 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SOD1P00441 SNORA33-201ENST00000363664 130 ntBASIC0.69□□□□□ -2.3
SOD1P00441 RNU6-456P-201ENST00000384493 107 ntBASIC0.69□□□□□ -2.3
SOD1P00441 CDK8P2-201ENST00000415020 547 ntBASIC0.69□□□□□ -2.3
SOD1P00441 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.69□□□□□ -2.3
SOD1P00441 AC010099.3-201ENST00000423896 409 ntBASIC0.69□□□□□ -2.3
SOD1P00441 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.69□□□□□ -2.3
SOD1P00441 RNU7-125P-201ENST00000458760 62 ntBASIC0.69□□□□□ -2.3
SOD1P00441 RPS26P45-201ENST00000471748 340 ntBASIC0.69□□□□□ -2.3
SOD1P00441 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.69□□□□□ -2.3
SOD1P00441 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.69□□□□□ -2.3
SOD1P00441 RNU6-165P-201ENST00000517170 99 ntBASIC0.69□□□□□ -2.3
SOD1P00441 CYCSP23-201ENST00000519781 313 ntBASIC0.69□□□□□ -2.3
SOD1P00441 AC068790.2-201ENST00000602601 557 ntBASIC0.69□□□□□ -2.3
SOD1P00441 AL078603.1-201ENST00000603824 313 ntBASIC0.69□□□□□ -2.3
SOD1P00441 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
SOD1P00441 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 244.3 ms