Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNU6-975P-201ENST00000384296 105 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-517P-201ENST00000384362 110 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR515-2-201ENST00000384883 83 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR515-1-201ENST00000384884 83 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MTCO2P11-201ENST00000431069 680 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 HMGN2P34-201ENST00000437647 269 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU7-180P-201ENST00000459240 63 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU7-138P-201ENST00000459479 64 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-612P-201ENST00000516909 102 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-323P-201ENST00000521915 107 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 HIF1AP1-201ENST00000553642 175 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 SUB1P2-201ENST00000556401 297 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR3664-201ENST00000579074 99 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MTATP6P3-201ENST00000581686 676 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 AC040896.1-201ENST00000613819 479 ntBASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-227P-201ENST00000362865 103 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORD73A-201ENST00000386062 65 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORA26.8-201ENST00000391306 124 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RPS6P15-201ENST00000431996 751 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC244505.5-201ENST00000443639 207 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RPS26P45-201ENST00000471748 340 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AL163195.1-201ENST00000496941 348 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RPL39P5-202ENST00000512505 151 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORD116-28-201ENST00000516123 91 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RN7SKP287-201ENST00000516546 266 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 CENPUP1-201ENST00000526649 1202 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC068790.2-201ENST00000602601 557 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC016727.2-201ENST00000603988 621 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC093424.1-201ENST00000604999 338 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC104458.1-201ENST00000608243 463 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 AC099654.5-201ENST00000636479 350 ntBASIC1.03□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU1-22P-201ENST00000363334 158 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 SNORA29-201ENST00000384183 140 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AL390237.1-201ENST00000404226 1415 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AL031667.1-201ENST00000440222 725 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AC004386.2-201ENST00000441858 148 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AC016717.1-201ENST00000448918 286 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 RN7SKP88-201ENST00000516847 250 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 MTND1P24-201ENST00000552175 861 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 7SK.8-201ENST00000612110 250 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 7SK.11-201ENST00000615477 250 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 7SK.13-201ENST00000622040 250 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.02□□□□□ -2.25
CCNB1IP1Q9NPC3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AL356776.1-201ENST00000406574 447 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 MTATP6P18-201ENST00000417994 673 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 PGBD4P5-201ENST00000445958 426 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC009237.7-201ENST00000447357 229 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 NFU1P2-201ENST00000448700 469 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC114982.1-201ENST00000469402 321 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 HMGN1P12-201ENST00000499125 195 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-237P-201ENST00000515985 71 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC024995.1-201ENST00000523014 93 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 MIR3913-1-201ENST00000577744 102 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 MIR5006-201ENST00000583027 110 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 snoU13.31-201ENST00000607291 104 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC072046.2-201ENST00000618366 268 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 AC005609.4-201ENST00000625071 447 ntBASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CCNB1IP1Q9NPC3 Y_RNA.287-201ENST00000364853 94 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AC004866.1-201ENST00000411748 78 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms