Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RNU6-89P-201ENST00000606519 100 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 AC064836.2-201ENST00000609491 462 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
NPAS2Q99743 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.51□□□□□ -2.17
NPAS2Q99743 RNU6-112P-201ENST00000363599 104 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 RNU6-82P-201ENST00000363970 107 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 RNU6-438P-201ENST00000365561 103 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 Y_RNA.615-201ENST00000410769 117 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 MTCO1P20-201ENST00000425366 358 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 MRPS10P2-201ENST00000431226 381 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 MTCO1P44-201ENST00000441935 243 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AC091435.1-201ENST00000505442 584 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.5□□□□□ -2.17
NPAS2Q99743 ATP5EP1-201ENST00000510257 156 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 RNU6-1069P-201ENST00000516612 133 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
NPAS2Q99743 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.5□□□□□ -2.17
NPAS2Q99743 TPRKBP2-201ENST00000565969 475 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 EIF1P4-201ENST00000572664 335 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.5□□□□□ -2.17
NPAS2Q99743 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AC005520.5-201ENST00000613926 164 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AL136221.1-201ENST00000621449 509 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 FER-210ENST00000628534 558 ntTSL 5 BASIC1.5□□□□□ -2.17
NPAS2Q99743 AL450472.1-202ENST00000637286 180 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AC068137.3-201ENST00000639191 341 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.5□□□□□ -2.17
NPAS2Q99743 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
NPAS2Q99743 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
NPAS2Q99743 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.49□□□□□ -2.17
NPAS2Q99743 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
NPAS2Q99743 RNU6-451P-201ENST00000362921 107 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 RNU6-1215P-201ENST00000384441 102 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 AP000275.1-201ENST00000411943 390 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 SNRPEP8-201ENST00000442866 260 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.49□□□□□ -2.17
NPAS2Q99743 AC008628.2-201ENST00000502605 298 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 AC097473.1-201ENST00000508142 408 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 SNORD60.2-201ENST00000516883 86 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 SUMO2P18-201ENST00000518873 252 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.49□□□□□ -2.17
NPAS2Q99743 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
NPAS2Q99743 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
NPAS2Q99743 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 CTHRC1P1-201ENST00000605383 469 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 DISC2.1-201ENST00000612827 205 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 FAM157A-202ENST00000615155 405 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.49□□□□□ -2.17
NPAS2Q99743 MIR1321-201ENST00000637766 79 ntBASIC1.49□□□□□ -2.17
NPAS2Q99743 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
NPAS2Q99743 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.48□□□□□ -2.17
NPAS2Q99743 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.48□□□□□ -2.17
NPAS2Q99743 RNU1-76P-201ENST00000362903 159 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 RNU6-1252P-201ENST00000363054 104 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 SNORD31B-201ENST00000364977 69 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 Y_RNA.373-201ENST00000365600 103 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 SNORA36A-201ENST00000384221 132 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 RNU2-41P-201ENST00000410991 178 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 MTCO1P21-201ENST00000416634 589 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 AC139712.2-201ENST00000424302 339 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NPAS2Q99743 ERLEC1P1-201ENST00000433806 578 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 AC016925.1-201ENST00000458303 298 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 AC091885.1-201ENST00000506658 268 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 Y_RNA.665-201ENST00000516177 98 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 RNU6-1332P-201ENST00000516666 104 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.48□□□□□ -2.17
NPAS2Q99743 MTND1P35-201ENST00000526739 508 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.48□□□□□ -2.17
NPAS2Q99743 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.48□□□□□ -2.17
NPAS2Q99743 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
NPAS2Q99743 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NPAS2Q99743 RNY3P3-201ENST00000363816 102 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 Y_RNA.226-201ENST00000364337 114 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 Y_RNA.256-201ENST00000364594 104 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 RNU4-12P-201ENST00000365233 139 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 Y_RNA.504-201ENST00000384481 104 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 MIR181A1-201ENST00000385026 110 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 EIF4E2P1-201ENST00000393781 255 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 MIR548F1-201ENST00000408667 84 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.47□□□□□ -2.17
NPAS2Q99743 Z82205.1-201ENST00000428456 297 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 MTND3P21-201ENST00000433774 331 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 UBE2V1P8-201ENST00000437166 265 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 MTCO2P3-201ENST00000442543 421 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AL357134.1-201ENST00000445848 426 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.47□□□□□ -2.17
NPAS2Q99743 TOMM22P6-201ENST00000465035 409 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.47□□□□□ -2.17
NPAS2Q99743 AC092436.3-201ENST00000511788 257 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 RNU5F-4P-201ENST00000516581 114 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 RNU6-1098P-201ENST00000516772 96 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AC087854.1-201ENST00000519706 414 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AL157687.1-201ENST00000554853 619 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms