Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PAX9P55771 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
PAX9P55771 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
PAX9P55771 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.96□□□□□ -2.1
PAX9P55771 ZNF720P1-201ENST00000562403 1939 ntBASIC1.96□□□□□ -2.1
PAX9P55771 Y_RNA.252-201ENST00000364556 101 ntBASIC1.96□□□□□ -2.1
PAX9P55771 Y_RNA.319-201ENST00000365138 92 ntBASIC1.96□□□□□ -2.1
PAX9P55771 SNORA18.2-201ENST00000383865 132 ntBASIC1.96□□□□□ -2.1
PAX9P55771 MIR10B-201ENST00000385011 110 ntBASIC1.96□□□□□ -2.1
PAX9P55771 RNU2-32P-201ENST00000411193 191 ntBASIC1.96□□□□□ -2.1
PAX9P55771 AC007098.1-201ENST00000420122 367 ntBASIC1.96□□□□□ -2.1
PAX9P55771 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PAX9P55771 MTCO2P12-201ENST00000427426 682 ntBASIC1.96□□□□□ -2.1
PAX9P55771 CBX3P6-201ENST00000430257 527 ntBASIC1.96□□□□□ -2.1
PAX9P55771 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.96□□□□□ -2.1
PAX9P55771 AL035666.1-201ENST00000446195 348 ntBASIC1.96□□□□□ -2.1
PAX9P55771 IFNA11P-201ENST00000446352 526 ntBASIC1.96□□□□□ -2.1
PAX9P55771 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.96□□□□□ -2.1
PAX9P55771 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.96□□□□□ -2.1
PAX9P55771 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.96□□□□□ -2.1
PAX9P55771 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.96□□□□□ -2.1
PAX9P55771 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.96□□□□□ -2.1
PAX9P55771 RNU6-976P-201ENST00000516086 111 ntBASIC1.96□□□□□ -2.1
PAX9P55771 PRELID2P1-201ENST00000552837 301 ntBASIC1.96□□□□□ -2.1
PAX9P55771 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.96□□□□□ -2.1
PAX9P55771 AL132822.1-201ENST00000617063 513 ntBASIC1.96□□□□□ -2.1
PAX9P55771 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.96□□□□□ -2.1
PAX9P55771 AC138305.3-201ENST00000624988 240 ntBASIC1.96□□□□□ -2.1
PAX9P55771 MIR1248-201ENST00000629190 106 ntBASIC1.96□□□□□ -2.1
PAX9P55771 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PAX9P55771 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.96□□□□□ -2.1
PAX9P55771 ZNF204P-201ENST00000416749 2397 ntBASIC1.95□□□□□ -2.1
PAX9P55771 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PAX9P55771 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PAX9P55771 MTND5P16-201ENST00000460269 1703 ntBASIC1.95□□□□□ -2.1
PAX9P55771 RNU6-859P-201ENST00000362728 107 ntBASIC1.95□□□□□ -2.1
PAX9P55771 Y_RNA.358-201ENST00000365491 99 ntBASIC1.95□□□□□ -2.1
PAX9P55771 Y_RNA.364-201ENST00000365532 101 ntBASIC1.95□□□□□ -2.1
PAX9P55771 RNU6-546P-201ENST00000383991 107 ntBASIC1.95□□□□□ -2.1
PAX9P55771 RNU6-159P-201ENST00000391080 106 ntBASIC1.95□□□□□ -2.1
PAX9P55771 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.95□□□□□ -2.1
PAX9P55771 PMCHL1-202ENST00000423102 261 ntBASIC1.95□□□□□ -2.1
PAX9P55771 AC027124.2-201ENST00000428249 105 ntBASIC1.95□□□□□ -2.1
PAX9P55771 ARL5AP4-201ENST00000430731 512 ntBASIC1.95□□□□□ -2.1
PAX9P55771 AL513328.1-201ENST00000446460 224 ntBASIC1.95□□□□□ -2.1
PAX9P55771 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.95□□□□□ -2.1
PAX9P55771 AC107032.1-201ENST00000485945 480 ntBASIC1.95□□□□□ -2.1
PAX9P55771 ANXA2P1-201ENST00000505539 926 ntBASIC1.95□□□□□ -2.1
PAX9P55771 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.95□□□□□ -2.1
PAX9P55771 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.95□□□□□ -2.1
PAX9P55771 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.95□□□□□ -2.1
PAX9P55771 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PAX9P55771 AC022616.8-201ENST00000533569 253 ntBASIC1.95□□□□□ -2.1
PAX9P55771 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
PAX9P55771 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.95□□□□□ -2.1
PAX9P55771 AC090517.1-201ENST00000569307 266 ntBASIC1.95□□□□□ -2.1
PAX9P55771 LARP7P3-201ENST00000579888 337 ntBASIC1.95□□□□□ -2.1
PAX9P55771 AC067747.1-201ENST00000608026 250 ntBASIC1.95□□□□□ -2.1
PAX9P55771 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.95□□□□□ -2.1
PAX9P55771 BX322639.1-202ENST00000423987 2213 ntBASIC1.95□□□□□ -2.1
PAX9P55771 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.95□□□□□ -2.1
PAX9P55771 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PAX9P55771 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
PAX9P55771 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.94□□□□□ -2.1
PAX9P55771 RNU6-137P-201ENST00000363680 108 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNU6-873P-201ENST00000363833 107 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNU4-42P-201ENST00000364738 142 ntBASIC1.94□□□□□ -2.1
PAX9P55771 SNORA25B-201ENST00000365507 128 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNU6-26P-201ENST00000383985 107 ntBASIC1.94□□□□□ -2.1
PAX9P55771 Y_RNA.445-201ENST00000384168 102 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNY1P14-201ENST00000384426 108 ntBASIC1.94□□□□□ -2.1
PAX9P55771 Y_RNA.557-201ENST00000384680 107 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNU1-139P-201ENST00000391307 165 ntBASIC1.94□□□□□ -2.1
PAX9P55771 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
PAX9P55771 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
PAX9P55771 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.94□□□□□ -2.1
PAX9P55771 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
PAX9P55771 WARS2P1-201ENST00000429678 537 ntBASIC1.94□□□□□ -2.1
PAX9P55771 USP9YP16-201ENST00000430287 407 ntBASIC1.94□□□□□ -2.1
PAX9P55771 AC099799.1-201ENST00000439809 192 ntBASIC1.94□□□□□ -2.1
PAX9P55771 MTCYBP6-201ENST00000441810 138 ntBASIC1.94□□□□□ -2.1
PAX9P55771 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.94□□□□□ -2.1
PAX9P55771 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.94□□□□□ -2.1
PAX9P55771 MTCO3P8-201ENST00000453691 755 ntBASIC1.94□□□□□ -2.1
PAX9P55771 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.94□□□□□ -2.1
PAX9P55771 USP9YP23-201ENST00000455085 407 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNU7-87P-201ENST00000459343 62 ntBASIC1.94□□□□□ -2.1
PAX9P55771 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.94□□□□□ -2.1
PAX9P55771 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.94□□□□□ -2.1
PAX9P55771 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.94□□□□□ -2.1
PAX9P55771 AC096725.1-201ENST00000514266 313 ntBASIC1.94□□□□□ -2.1
PAX9P55771 Y_RNA.661-201ENST00000516003 99 ntBASIC1.94□□□□□ -2.1
PAX9P55771 RNU6-1098P-201ENST00000516772 96 ntBASIC1.94□□□□□ -2.1
PAX9P55771 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.94□□□□□ -2.1
PAX9P55771 AC020661.2-201ENST00000560114 134 ntBASIC1.94□□□□□ -2.1
PAX9P55771 AC090617.3-201ENST00000573670 475 ntBASIC1.94□□□□□ -2.1
PAX9P55771 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.94□□□□□ -2.1
PAX9P55771 SNRPGP17-201ENST00000603780 214 ntBASIC1.94□□□□□ -2.1
PAX9P55771 MIR7106-201ENST00000612419 65 ntBASIC1.94□□□□□ -2.1
PAX9P55771 U4atac.1-201ENST00000618345 95 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms