Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL365203.2-201ENST00000423444 196 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 AC073910.1-201ENST00000445047 438 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 C1DP4-201ENST00000455429 424 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 AC105417.1-201ENST00000514691 285 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR3915-201ENST00000578518 97 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-85P-201ENST00000605989 107 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 AC009033.1-201ENST00000624279 431 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU4-91P-201ENST00000364778 135 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-534P-201ENST00000364877 106 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORA72.3-201ENST00000365074 132 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORA4.2-201ENST00000365313 147 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-903P-201ENST00000391270 109 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AP1B1P2-201ENST00000416196 106 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 USP9YP14-201ENST00000430663 563 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AL356010.1-201ENST00000456364 102 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 SNRPFP3-201ENST00000457792 225 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR4742-201ENST00000581069 85 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR3660-201ENST00000584845 100 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.08□□□□□ -2.24
CCNB1IP1Q9NPC3 AL391987.6-201ENST00000305671 199 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORA72.2-201ENST00000365028 127 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC090960.1-201ENST00000421072 306 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 CETN4P-201ENST00000432407 469 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC060788.1-201ENST00000521318 469 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AL442163.3-201ENST00000554110 156 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC025449.1-201ENST00000603896 529 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 MZT1P2-201ENST00000604387 248 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 U2.17-201ENST00000611454 95 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC007494.3-201ENST00000624660 743 ntBASIC1.07□□□□□ -2.24
CCNB1IP1Q9NPC3 AC009541.1-201ENST00000438279 2662 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 FGF7P8-201ENST00000402994 292 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU2-9P-201ENST00000410194 145 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 COX6CP10-201ENST00000416832 224 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 MTND2P18-201ENST00000419962 1030 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 AC132479.1-201ENST00000449160 144 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 snoU13.6-201ENST00000458785 104 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-498P-201ENST00000459468 107 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 AL163540.1-201ENST00000485382 386 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR4709-201ENST00000577272 72 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR5583-1-201ENST00000580941 59 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR4753-201ENST00000585119 83 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 AC005562.2-201ENST00000618264 111 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 AL359697.1-201ENST00000624879 587 ntBASIC1.06□□□□□ -2.24
CCNB1IP1Q9NPC3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 RNY3P10-201ENST00000384764 102 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 MT-TH-201ENST00000387441 69 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 RPS26P42-201ENST00000413485 326 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 MTND4P32-201ENST00000437189 1237 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 SNRPGP9-201ENST00000456025 225 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 RPS29P27-201ENST00000463711 170 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-415P-201ENST00000516252 97 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 RNU6-948P-201ENST00000516374 107 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AC026470.2-201ENST00000561492 181 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AC023043.2-201ENST00000589678 1026 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 AC009509.4-201ENST00000619202 509 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 MIR8065-201ENST00000620577 100 ntBASIC1.05□□□□□ -2.24
CCNB1IP1Q9NPC3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCNB1IP1Q9NPC3 SNORA33-201ENST00000363664 130 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 351 ms