Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.5□□□□□ -1.85
EPHB3P54753 AL513302.2-201ENST00000562313 1842 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 FTLP6-201ENST00000355274 422 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 RNA5SP295-201ENST00000362655 121 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 SNORD56.1-201ENST00000362913 68 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 Y_RNA.101-201ENST00000363154 102 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 Y_RNA.273-201ENST00000364703 102 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 RNU6-217P-201ENST00000384164 104 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 SNORA36A-201ENST00000384221 132 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 SNORD20-201ENST00000384550 80 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 MIR128-1-201ENST00000384921 82 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 SNORA26.3-201ENST00000391119 136 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AL591034.1-201ENST00000407447 340 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 RNU6-1199P-201ENST00000411249 104 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.5□□□□□ -1.85
EPHB3P54753 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.5□□□□□ -1.85
EPHB3P54753 RNU6-625P-201ENST00000459412 107 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AL121594.1-201ENST00000475906 575 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.5□□□□□ -1.85
EPHB3P54753 HIGD1AP1-201ENST00000550979 275 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AC018448.1-201ENST00000552843 316 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AC021231.3-201ENST00000558497 370 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 MIR5004-201ENST00000579078 107 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 MIR3684-201ENST00000579779 74 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 MIR3145-201ENST00000580727 82 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 AL136164.4-201ENST00000625013 2135 ntBASIC3.5□□□□□ -1.85
EPHB3P54753 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
EPHB3P54753 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB3P54753 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB3P54753 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB3P54753 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
EPHB3P54753 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB3P54753 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 AC100821.1-201ENST00000523153 2479 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.49□□□□□ -1.85
EPHB3P54753 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 AC092268.1-201ENST00000342691 405 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 Y_RNA.353-201ENST00000365440 108 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 RNU6-1248P-201ENST00000391096 64 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.49□□□□□ -1.85
EPHB3P54753 BTF3P11-201ENST00000426582 477 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 RAB28P5-201ENST00000427490 651 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 AC078809.1-201ENST00000427601 140 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 RPS15AP5-201ENST00000436276 388 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 AP000705.1-201ENST00000454567 350 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.49□□□□□ -1.85
EPHB3P54753 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.49□□□□□ -1.85
EPHB3P54753 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.49□□□□□ -1.85
EPHB3P54753 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
EPHB3P54753 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
EPHB3P54753 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.49□□□□□ -1.85
EPHB3P54753 MTND5P35-201ENST00000557537 1720 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 Y_RNA.182-201ENST00000363880 111 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 RNU6-275P-201ENST00000364910 107 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 RNU1-73P-201ENST00000383971 164 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 RNU6-239P-201ENST00000390990 99 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 SNORA48.5-201ENST00000391143 135 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AC126124.2-201ENST00000413542 321 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.48□□□□□ -1.85
EPHB3P54753 RPL37P4-201ENST00000448908 268 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 snoU13.6-201ENST00000458785 104 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 RNU7-121P-201ENST00000516604 62 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AC107934.2-201ENST00000518653 310 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AC100767.1-201ENST00000528178 123 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHB3P54753 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 MIR5047-201ENST00000579212 100 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHB3P54753 AC011471.1-201ENST00000585766 187 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AC244205.2-202ENST00000635781 342 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 AC017071.1-201ENST00000564407 2204 ntBASIC3.48□□□□□ -1.85
EPHB3P54753 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHB3P54753 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
EPHB3P54753 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
EPHB3P54753 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.48□□□□□ -1.85
EPHB3P54753 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHB3P54753 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHB3P54753 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
EPHB3P54753 AC022336.2-201ENST00000568966 2538 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
EPHB3P54753 AC010332.2-201ENST00000613083 1904 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
EPHB3P54753 RNA5SP374-201ENST00000362939 125 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 RNU6-151P-201ENST00000364158 107 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 RNU6-818P-201ENST00000364837 108 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 MIR544A-201ENST00000384855 91 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 MIR325-201ENST00000385260 98 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 RNU2-54P-201ENST00000410299 190 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 ELOCP21-201ENST00000412558 336 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHB3P54753 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.47□□□□□ -1.85
EPHB3P54753 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.47□□□□□ -1.85
EPHB3P54753 RPL23AP62-201ENST00000463396 453 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 RPL30P12-201ENST00000474666 353 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 RPL30P5-201ENST00000494923 336 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms