Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 HIGD1AP2-201ENST00000446367 280 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 HMGB1P30-201ENST00000492455 606 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 PTP4A1P4-201ENST00000512479 322 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 RNU6-976P-201ENST00000516086 111 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 AP005902.1-201ENST00000521358 186 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 CPDP1-201ENST00000579660 283 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.53□□□□□ -2
DDX43Q9NXZ2 AC096772.1-201ENST00000609146 564 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 Z69720.2-201ENST00000624755 279 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 SCARNA4-202ENST00000625402 129 ntBASIC2.53□□□□□ -2
DDX43Q9NXZ2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.53□□□□□ -2
DDX43Q9NXZ2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX43Q9NXZ2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 Y_RNA.252-201ENST00000364556 101 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 RNU6-331P-201ENST00000384724 107 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 AL030996.1-201ENST00000411430 235 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 AL133396.1-201ENST00000432048 687 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 snoU109.2-201ENST00000459316 135 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 RNU6-120P-201ENST00000516077 103 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 RNU1-54P-201ENST00000517181 120 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 RN7SKP295-201ENST00000517264 153 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 TRAV32-201ENST00000553993 340 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 RPS15AP11-201ENST00000594193 385 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 MIR3529-201ENST00000637713 78 ntBASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DDX43Q9NXZ2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 OR56A5-201ENST00000340110 738 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 RNU6-942P-201ENST00000363002 107 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 Y_RNA.145-201ENST00000363527 102 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 RNU6-596P-201ENST00000365395 98 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 MIR517A-201ENST00000385001 87 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 RNU6-174P-201ENST00000410406 106 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 SNORD56-201ENST00000413522 71 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC113618.1-201ENST00000416747 285 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 MCFD2P1-201ENST00000417812 300 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 USMG5P1-201ENST00000425964 177 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC012308.1-201ENST00000451232 178 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 SCARNA16.2-201ENST00000516520 172 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 RNU6-1046P-201ENST00000516538 107 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC136443.5-201ENST00000603741 370 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC133104.2-201ENST00000615272 193 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 MIR6715A-201ENST00000615929 79 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AC064859.1-201ENST00000624741 174 ntBASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
DDX43Q9NXZ2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 RNY1P14-201ENST00000384426 108 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 RNU6-843P-201ENST00000384454 104 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 RNU2-63P-201ENST00000410792 194 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 RNU6-325P-201ENST00000411132 105 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AL117339.3-201ENST00000418733 162 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AC013470.1-201ENST00000453438 462 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AC006026.2-201ENST00000457376 180 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 TRBV12-1-201ENST00000479785 344 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 RNU6-470P-201ENST00000515954 104 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 PRELID2P1-201ENST00000552837 301 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AL138963.2-201ENST00000605137 226 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AL121917.1-203ENST00000605534 577 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 AC007485.1-201ENST00000616755 206 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 PISRT1.1-201ENST00000616930 107 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 MTND4P1-201ENST00000457501 1466 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 HAUS6P2-201ENST00000433254 2404 ntBASIC2.5□□□□□ -2.01
DDX43Q9NXZ2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-37P-201ENST00000362692 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 SNORD114-19-201ENST00000363072 75 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 Y_RNA.133-201ENST00000363428 110 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-11P-201ENST00000364234 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-25P-201ENST00000383873 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-1-201ENST00000383898 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-639P-201ENST00000384074 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-48P-201ENST00000384161 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-36P-201ENST00000384172 107 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms