Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 EIF4EP4-201ENST00000424916 578 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC133104.1-201ENST00000429100 218 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN4AP35499 AC010493.1-201ENST00000513479 292 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6-377P-201ENST00000515965 102 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN4AP35499 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN4AP35499 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN4AP35499 AC022616.8-201ENST00000533569 253 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN4AP35499 AL121992.2-201ENST00000606262 256 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AL158209.2-201ENST00000619266 216 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6-486P-201ENST00000363116 107 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 SNORD70.1-201ENST00000391007 85 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AL606923.1-201ENST00000406616 190 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RAP1BP3-201ENST00000407180 549 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 Y_RNA.597-201ENST00000410463 100 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN4AP35499 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN4AP35499 MTCO2P19-201ENST00000427513 598 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 TIMM9P3-201ENST00000428659 274 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC005534.2-201ENST00000431047 433 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN4AP35499 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN4AP35499 MTCO2P18-201ENST00000457151 658 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC022364.2-201ENST00000457963 554 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6-261P-201ENST00000459506 102 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 MTCO3P28-201ENST00000513351 515 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU2-53P-201ENST00000516257 147 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6-314P-201ENST00000516574 104 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 SNORA43.2-201ENST00000516652 128 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 SNORA31.16-201ENST00000516773 139 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU2-46P-201ENST00000517038 113 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SCN4AP35499 MIR4703-201ENST00000577728 79 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC078899.2-201ENST00000595282 212 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AL356157.2-201ENST00000605122 111 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AL627230.6-201ENST00000611129 280 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 Z99129.1-201ENST00000612510 255 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC026585.1-201ENST00000619582 524 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC136475.10-201ENST00000620253 385 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AC022079.1-201ENST00000621546 602 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 AP003400.5-201ENST00000624827 617 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 MIR3529-201ENST00000637713 78 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RBBP8P1-201ENST00000449447 1844 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.35□□□□□ -2.19
SCN4AP35499 Y_RNA.367-201ENST00000365544 101 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 RNU6-546P-201ENST00000383991 107 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 RNU6-259P-201ENST00000383999 107 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 RNU6-1105P-201ENST00000384774 107 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 MIR10A-201ENST00000385043 110 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 CBX3P9-201ENST00000402326 552 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 RNU2-63P-201ENST00000410792 194 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN4AP35499 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN4AP35499 AL031667.1-201ENST00000440222 725 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.35□□□□□ -2.19
SCN4AP35499 AC007969.2-201ENST00000441891 191 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 AC011005.2-201ENST00000487324 359 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SCN4AP35499 RNA5SP384-201ENST00000516615 116 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 AC079598.5-201ENST00000547460 117 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 MIR4295-201ENST00000585286 85 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.35□□□□□ -2.19
SCN4AP35499 AC078795.2-201ENST00000602835 1252 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SCN4AP35499 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.35□□□□□ -2.19
SCN4AP35499 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SCN4AP35499 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.35□□□□□ -2.19
SCN4AP35499 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
SCN4AP35499 RNU1-62P-201ENST00000362599 164 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RNU6-1010P-201ENST00000362757 107 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RNU1-72P-201ENST00000362976 153 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RNU6-142P-201ENST00000384019 107 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RNU6-1042P-201ENST00000384204 107 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RNU11-3P-201ENST00000391111 133 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RPS29P13-201ENST00000402041 169 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN4AP35499 C1DP2-201ENST00000418167 426 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.34□□□□□ -2.19
SCN4AP35499 AL022238.1-201ENST00000442557 355 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN4AP35499 PRPS1P1-201ENST00000445305 876 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AL583843.1-201ENST00000456070 346 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN4AP35499 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN4AP35499 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.34□□□□□ -2.19
SCN4AP35499 RNU6-1069P-201ENST00000516612 133 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AC087854.1-201ENST00000519706 414 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AC060788.1-201ENST00000521318 469 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN4AP35499 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.34□□□□□ -2.19
SCN4AP35499 CYP3A137P-201ENST00000562436 69 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 MIR4287-201ENST00000579398 78 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 MIR4714-201ENST00000580728 77 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AC021646.1-201ENST00000605469 484 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms