Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL161912.2-201ENST00000565707 3007 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AC007256.1-201ENST00000392253 2765 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC093010.3-201ENST00000570269 15214 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU1-35P-201ENST00000362782 153 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU6-47P-201ENST00000383866 107 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU6-198P-201ENST00000384258 104 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNA5SP424-201ENST00000390988 115 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AL512633.1-201ENST00000399931 655 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU2-49P-201ENST00000410666 184 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 SNORA84-201ENST00000459229 133 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU7-23P-201ENST00000459465 62 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC091179.3-201ENST00000474761 144 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RPL21P129-201ENST00000491732 478 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU6-861P-201ENST00000516745 106 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNA5SP143-201ENST00000516936 115 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU6-255P-201ENST00000516957 105 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU6-1212P-201ENST00000517023 104 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RPS15AP11-201ENST00000594193 385 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC010620.2-201ENST00000600135 313 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AL162713.1-201ENST00000604480 262 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 RNU6-91P-201ENST00000607774 107 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC005520.5-201ENST00000613926 164 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 U7.8-201ENST00000619968 63 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 AC099654.7-201ENST00000635788 2127 ntBASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCHD1Q96NR3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AC091152.2-201ENST00000591628 2569 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 PTMAP2-201ENST00000397627 327 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 MIR320B2-201ENST00000408479 138 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 RAB28P5-201ENST00000427490 651 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AL441985.1-201ENST00000457727 251 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AP002884.2-201ENST00000471647 395 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 MIR3923-201ENST00000579521 83 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AL034555.1-201ENST00000604816 211 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AC072026.1-201ENST00000605023 201 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 U2.22-201ENST00000636441 106 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 AC007496.3-201ENST00000624987 3443 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCHD1Q96NR3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 SNORA48.7-201ENST00000391302 135 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 RNU6-493P-201ENST00000391321 108 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 CBX3P9-201ENST00000402326 552 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AL035423.1-201ENST00000420331 213 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AL133547.1-201ENST00000448546 220 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 RNU6-966P-201ENST00000516479 104 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AC022559.1-201ENST00000520905 205 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AL391261.4-201ENST00000616012 481 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 AL138880.2-201ENST00000616214 239 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTCHD1Q96NR3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AL157777.2-201ENST00000258070 137 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU1-62P-201ENST00000362599 164 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNA5SP124-201ENST00000362739 110 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 Y_RNA.101-201ENST00000363154 102 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU6-529P-201ENST00000363383 104 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU6-727P-201ENST00000363592 107 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AL359837.1-201ENST00000381357 287 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 MIR200C-201ENST00000384980 68 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 MIR591-201ENST00000385290 95 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 HMGN2P8-201ENST00000391458 268 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 ELOCP21-201ENST00000412558 336 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms