Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 TREX1-205ENST00000625293 1783 ntBASIC23.64■■□□□ 1.37
SH3TC1Q8TE82 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
SH3TC1Q8TE82 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH3TC1Q8TE82 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.64■■□□□ 1.37
SH3TC1Q8TE82 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.64■■□□□ 1.37
SH3TC1Q8TE82 Z82202.1-201ENST00000623446 1880 ntBASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 DUSP5P1-201ENST00000441325 1139 ntBASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH3TC1Q8TE82 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
SH3TC1Q8TE82 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.61■■□□□ 1.37
SH3TC1Q8TE82 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 AL645929.1-201ENST00000420084 975 ntBASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.6■■□□□ 1.37
SH3TC1Q8TE82 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 ATP5G2P1-201ENST00000433580 426 ntBASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 SEC1P-202ENST00000473944 940 ntBASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 TEX21P-204ENST00000641479 1693 ntBASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms