Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 MIR4444-2-201ENST00000584390 74 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 AC012468.1-201ENST00000604888 430 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 MIR8069-1-201ENST00000616627 86 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 MIR8069-2-201ENST00000621412 86 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 AC080128.1-201ENST00000474389 1917 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-1125P-201ENST00000363601 107 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 Y_RNA.213-201ENST00000364178 111 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 Y_RNA.366-201ENST00000365540 102 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 SNORA18.2-201ENST00000383865 132 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-629P-201ENST00000384061 103 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 MIR548B-201ENST00000385247 97 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 CYCSP48-201ENST00000417124 323 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 AL500522.2-201ENST00000448562 343 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 RNU2-13P-201ENST00000515909 113 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 RNU2-44P-201ENST00000516795 194 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 AL451007.1-201ENST00000595491 289 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 BMS1P21-201ENST00000634565 365 ntBASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC61Q9Y6R9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-414P-201ENST00000363705 104 ntBASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 RNA5SP201-201ENST00000410316 124 ntBASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 AC023632.4-201ENST00000517783 191 ntBASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 IFITM8P-201ENST00000522529 394 ntBASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 AC084364.2-201ENST00000546924 395 ntBASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC61Q9Y6R9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-217P-201ENST00000384164 104 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 SNORA67.2-201ENST00000384300 149 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 RNA5SP171-201ENST00000391071 115 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 AC010285.1-201ENST00000470580 392 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-857P-201ENST00000515893 110 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-581P-201ENST00000516214 105 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 AC006064.5-201ENST00000541782 248 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 MIR4662B-201ENST00000579498 81 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 MIR2681-201ENST00000581814 105 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 MIR7151-201ENST00000617477 60 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 MIR4662A-201ENST00000637499 67 ntBASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC61Q9Y6R9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
CCDC61Q9Y6R9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CCDC61Q9Y6R9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 RNU6-271P-201ENST00000363858 105 ntBASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 RN7SL604P-201ENST00000492589 296 ntBASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 AC011406.1-201ENST00000512440 370 ntBASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC61Q9Y6R9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 AC125336.1-201ENST00000508893 2827 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 AC083843.2-201ENST00000568248 6253 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 RN7SKP186-201ENST00000365371 303 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 CYCSP19-201ENST00000411715 316 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 AL121890.1-201ENST00000435457 205 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 RNA5SP360-201ENST00000516555 118 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 AC105137.2-201ENST00000569073 466 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 AC093732.2-201ENST00000607950 274 ntBASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC61Q9Y6R9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms