Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 LINC02555-201ENST00000563933 1951 ntBASIC0.73□□□□□ -2.29
CYSTM1Q9H1C7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
CYSTM1Q9H1C7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MTND4P23-201ENST00000447723 1363 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-271P-201ENST00000363858 105 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-827P-201ENST00000365553 106 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-438P-201ENST00000365561 103 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 Y_RNA.504-201ENST00000384481 104 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MIR513A1-201ENST00000385138 129 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MIR549A-201ENST00000385268 96 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 SNORA40.3-201ENST00000390964 122 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU2-8P-201ENST00000410727 190 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU2-7P-201ENST00000410794 178 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-607P-201ENST00000411283 108 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RPS3AP3-201ENST00000411933 242 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 BX295541.1-201ENST00000417774 250 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 CBX3P6-201ENST00000430257 527 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 GTF2IP13-201ENST00000438487 386 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MTND1P30-201ENST00000441241 901 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNA5SP269-201ENST00000459032 137 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AK3P2-201ENST00000507976 429 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AC108729.3-201ENST00000513484 108 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNA5SP503-201ENST00000517047 117 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AP003034.1-201ENST00000534621 422 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MIR5583-1-201ENST00000580941 59 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AC078795.3-201ENST00000602913 472 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AL136370.1-201ENST00000608166 691 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MIR6845-201ENST00000613182 61 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 MIR8074-201ENST00000615081 81 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 ZNF680P1-201ENST00000436625 1469 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 AP000560.1-201ENST00000624150 1937 ntBASIC0.72□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-1285P-201ENST00000363480 105 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-112P-201ENST00000363599 104 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-414P-201ENST00000363705 104 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 SNORD32B-201ENST00000364460 84 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-282P-201ENST00000365357 103 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-26P-201ENST00000383985 107 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-378P-201ENST00000384324 107 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-456P-201ENST00000384493 107 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 U8.13-201ENST00000390842 128 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 MIR1267-201ENST00000408723 78 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AL354695.1-201ENST00000427935 228 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 TOMM22P2-201ENST00000430735 237 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC244670.1-201ENST00000436879 112 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 MTND1P18-201ENST00000448191 573 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 snoU13.9-201ENST00000458927 103 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU7-14P-201ENST00000459331 62 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 MTND2P14-201ENST00000482139 351 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC104564.1-201ENST00000493028 407 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC005178.1-201ENST00000508392 440 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 MTCO3P7-201ENST00000510008 774 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 FABP5P5-201ENST00000515537 406 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-410P-201ENST00000517006 107 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-902P-201ENST00000517212 91 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RNA5SP437-201ENST00000517249 129 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC109479.2-201ENST00000517842 174 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 RAB11AP2-201ENST00000545905 639 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 AP000942.3-201ENST00000603702 160 ntBASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
CYSTM1Q9H1C7 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 MIR340-201ENST00000362125 95 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-661P-201ENST00000362409 107 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 RNU6-862P-201ENST00000362804 105 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 RNU1-17P-201ENST00000363022 152 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 SNORD70.1-201ENST00000391007 85 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 RNA5SP247-201ENST00000411181 105 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 RPL23AP36-201ENST00000413895 458 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 HIGD1AP15-201ENST00000416198 280 ntBASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.7□□□□□ -2.3
CYSTM1Q9H1C7 GPR143P-201ENST00000434155 205 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms