Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.11□□□□□ -1.75
NFKB1P19838 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NFKB1P19838 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NFKB1P19838 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NFKB1P19838 AC134026.1-201ENST00000623249 2239 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NFKB1P19838 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
NFKB1P19838 RNU6-50P-201ENST00000362356 103 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 Y_RNA.172-201ENST00000363765 102 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 SNORD115-30-201ENST00000364117 82 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 RNU4-10P-201ENST00000364383 140 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 RNU6-1325P-201ENST00000364905 105 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 Y_RNA.337-201ENST00000365312 102 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 SNORA72.4-201ENST00000384174 132 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 CBX3P9-201ENST00000402326 552 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 AL031003.1-201ENST00000404229 172 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 AL355497.1-201ENST00000406262 551 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 RNA5SP239-201ENST00000410218 129 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 AL591419.1-201ENST00000427423 339 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 RPL23AP58-201ENST00000440453 469 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NFKB1P19838 RNU6-1211P-201ENST00000459179 105 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 RPL31P41-201ENST00000477967 372 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.1□□□□□ -1.75
NFKB1P19838 RNU6-107P-201ENST00000516643 102 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 RNU6-928P-201ENST00000516876 104 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 AC011602.1-201ENST00000546484 331 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 GNRHR2P1-201ENST00000555315 631 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 MIR3923-201ENST00000579521 83 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 AC011471.1-201ENST00000585766 187 ntBASIC4.1□□□□□ -1.75
NFKB1P19838 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NFKB1P19838 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NFKB1P19838 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NFKB1P19838 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NFKB1P19838 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.09□□□□□ -1.75
NFKB1P19838 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NFKB1P19838 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NFKB1P19838 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NFKB1P19838 RNU6-199P-201ENST00000362954 107 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 RNU6-270P-201ENST00000364131 105 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 RNA5SP130-201ENST00000364431 114 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 Y_RNA.293-201ENST00000364908 93 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 Y_RNA.420-201ENST00000384043 110 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 RPS27P26-201ENST00000494583 239 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 AC005921.1-201ENST00000510589 286 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 AC005255.1-201ENST00000593748 216 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.09□□□□□ -1.75
NFKB1P19838 MIR6868-201ENST00000611215 58 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 Y_RNA.802-201ENST00000614892 130 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 MIR6830-201ENST00000636015 70 ntBASIC4.09□□□□□ -1.75
NFKB1P19838 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NFKB1P19838 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NFKB1P19838 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NFKB1P19838 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.09□□□□□ -1.76
NFKB1P19838 MAPK10-253ENST00000641010 4072 ntBASIC4.09□□□□□ -1.76
NFKB1P19838 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
NFKB1P19838 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NFKB1P19838 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NFKB1P19838 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NFKB1P19838 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NFKB1P19838 RNU6-834P-201ENST00000362367 110 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 RNU6-80P-201ENST00000384195 107 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 Y_RNA.542-201ENST00000384641 111 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 RNU6-710P-201ENST00000410424 105 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 AC005300.1-201ENST00000428401 373 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 RNU5F-2P-201ENST00000516066 82 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 AL034555.1-201ENST00000604816 211 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 MIR6716-201ENST00000613413 80 ntBASIC4.08□□□□□ -1.76
NFKB1P19838 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.08□□□□□ -1.76
NFKB1P19838 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
NFKB1P19838 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
NFKB1P19838 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.07□□□□□ -1.76
NFKB1P19838 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
NFKB1P19838 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.07□□□□□ -1.76
NFKB1P19838 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NFKB1P19838 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.07□□□□□ -1.76
NFKB1P19838 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.07□□□□□ -1.76
NFKB1P19838 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.07□□□□□ -1.76
NFKB1P19838 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
NFKB1P19838 RNA5SP189-201ENST00000364920 115 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 MIR616-201ENST00000385293 97 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 MIR1251-201ENST00000408552 70 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 RNA5SP129-201ENST00000410276 118 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
NFKB1P19838 RNU7-197P-201ENST00000458836 62 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 AC084357.1-201ENST00000473404 255 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 RN7SL271P-201ENST00000487601 295 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 RPS26P15-201ENST00000488067 348 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.07□□□□□ -1.76
NFKB1P19838 SCARNA8-201ENST00000515924 131 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 Y_RNA.686-201ENST00000516548 134 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 RNU6-344P-201ENST00000516635 111 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.07□□□□□ -1.76
NFKB1P19838 AC112693.2-201ENST00000556538 232 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.07□□□□□ -1.76
NFKB1P19838 SNORD11B-201ENST00000607707 90 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.07□□□□□ -1.76
NFKB1P19838 TUG1_4.1-201ENST00000619464 181 ntBASIC4.07□□□□□ -1.76
NFKB1P19838 AF127577.6-201ENST00000623352 2191 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms