Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NKX6-1P78426 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.05□□□□□ -1.92
NKX6-1P78426 AC027176.1-201ENST00000560204 514 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 MIR3923-201ENST00000579521 83 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AC010928.2-201ENST00000588017 287 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX6-1P78426 AL034555.1-201ENST00000604816 211 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AL138963.2-201ENST00000605137 226 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 YPEL5P2-201ENST00000605553 359 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AL355802.3-201ENST00000607571 545 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AC099778.2-201ENST00000610904 211 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 PART1_1.1-201ENST00000611761 217 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX6-1P78426 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX6-1P78426 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX6-1P78426 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NKX6-1P78426 AL513302.2-201ENST00000562313 1842 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX6-1P78426 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX6-1P78426 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NKX6-1P78426 MFSD8-233ENST00000641482 4860 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NKX6-1P78426 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX6-1P78426 RNU4-35P-201ENST00000362588 141 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 SNORA36A-201ENST00000384221 132 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 MIR606-201ENST00000384851 96 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 EIF4EP4-201ENST00000424916 578 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AC006989.1-201ENST00000427212 131 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AL160004.2-201ENST00000432935 350 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 RNU7-87P-201ENST00000459343 62 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 RNU7-169P-201ENST00000459456 61 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 RN7SL594P-201ENST00000470590 287 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AL121594.1-201ENST00000475906 575 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 SNORA31.16-201ENST00000516773 139 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX6-1P78426 HSBP1P1-201ENST00000555205 166 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 TGIF1P1-201ENST00000558095 802 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 CYP4A27P-201ENST00000567218 190 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 Z98751.3-201ENST00000604447 521 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AL670379.2-201ENST00000604983 252 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.04□□□□□ -1.92
NKX6-1P78426 AL606534.2-204ENST00000635008 178 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 MIR7157-201ENST00000635801 60 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 AL450472.1-202ENST00000637286 180 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NKX6-1P78426 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.04□□□□□ -1.92
NKX6-1P78426 AC005592.1-201ENST00000566527 1640 ntBASIC3.04□□□□□ -1.92
NKX6-1P78426 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.03□□□□□ -1.92
NKX6-1P78426 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NKX6-1P78426 MTND5P27-201ENST00000428871 1720 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 Y_RNA.40-201ENST00000362645 93 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 Y_RNA.158-201ENST00000363651 101 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 RNU6-283P-201ENST00000364788 107 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 RNU6-805P-201ENST00000365643 106 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 RNU6-17P-201ENST00000384245 107 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 RNU6-18P-201ENST00000384527 107 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 MIR628-201ENST00000385229 95 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 UBA52P6-201ENST00000399822 382 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 CBX3P9-201ENST00000402326 552 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 AC114482.1-201ENST00000418010 247 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 AL590556.1-201ENST00000423231 483 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 AIMP1P2-201ENST00000425294 312 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 OR2AQ1P-201ENST00000451972 200 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 TOMM22P6-201ENST00000465035 409 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 AC092185.1-201ENST00000491371 97 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 RNU6-475P-201ENST00000516073 104 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX6-1P78426 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX6-1P78426 U4.6-201ENST00000621618 127 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 AC243829.7-201ENST00000633081 225 ntBASIC3.03□□□□□ -1.92
NKX6-1P78426 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX6-1P78426 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX6-1P78426 Y_RNA.80-201ENST00000362996 102 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 RNU4-42P-201ENST00000364738 142 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 RNU6-1160P-201ENST00000384546 104 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 SNORA48.8-201ENST00000391324 134 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 RN7SKP111-201ENST00000410349 271 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 MICF-203ENST00000432679 129 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AC006028.1-201ENST00000438379 402 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX6-1P78426 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX6-1P78426 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX6-1P78426 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX6-1P78426 RNU4-77P-201ENST00000516692 156 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AP006245.1-201ENST00000522549 120 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX6-1P78426 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.02□□□□□ -1.93
NKX6-1P78426 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX6-1P78426 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 VN1R91P-201ENST00000594377 169 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms