Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC025554.1-201ENST00000505641 188 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RNU7-121P-201ENST00000516604 62 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AP002001.1-203ENST00000534002 267 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.25□□□□□ -1.73
NFKB1P19838 AC022655.2-201ENST00000577280 318 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 MIR548X2-201ENST00000579776 100 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AL451007.1-201ENST00000595491 289 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AL356575.1-201ENST00000603008 283 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.25□□□□□ -1.73
NFKB1P19838 AC114781.5-201ENST00000615297 108 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AL034408.1-202ENST00000636088 415 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.25□□□□□ -1.73
NFKB1P19838 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NFKB1P19838 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
NFKB1P19838 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.24□□□□□ -1.73
NFKB1P19838 RNU6-1280P-201ENST00000365211 107 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 RNA5SP366-201ENST00000365454 123 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 SNORA40-201ENST00000388090 126 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 RN7SKP53-201ENST00000411337 315 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 EBAG9P1-201ENST00000418955 543 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 RPS27AP10-201ENST00000496103 208 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.24□□□□□ -1.73
NFKB1P19838 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.24□□□□□ -1.73
NFKB1P19838 AC015813.4-201ENST00000610469 179 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 MIR3674-201ENST00000636576 68 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 MIR3529-201ENST00000637713 78 ntBASIC4.24□□□□□ -1.73
NFKB1P19838 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
NFKB1P19838 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NFKB1P19838 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
NFKB1P19838 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NFKB1P19838 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NFKB1P19838 Y_RNA.261-201ENST00000364631 102 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 RPL18P10-201ENST00000425606 538 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 RPL21P66-201ENST00000426566 466 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.23□□□□□ -1.73
NFKB1P19838 RPL39P29-201ENST00000447779 157 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.23□□□□□ -1.73
NFKB1P19838 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NFKB1P19838 Y_RNA.797-201ENST00000515977 94 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 HSPE1P5-201ENST00000561489 272 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 AL591034.3-201ENST00000605511 685 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 AC112200.1-201ENST00000625015 234 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
NFKB1P19838 AL133412.1-201ENST00000380194 2992 ntBASIC4.23□□□□□ -1.73
NFKB1P19838 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.22□□□□□ -1.73
NFKB1P19838 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NFKB1P19838 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NFKB1P19838 MIR383-201ENST00000362257 73 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 Y_RNA.329-201ENST00000365209 107 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 RNU6-487P-201ENST00000365430 104 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 SNORA37-201ENST00000384504 129 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 MIR93-201ENST00000385024 80 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 RNU6-763P-201ENST00000390865 106 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 SNORA11-201ENST00000408789 128 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 RNA5SP390-201ENST00000410191 113 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.22□□□□□ -1.73
NFKB1P19838 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.22□□□□□ -1.73
NFKB1P19838 RPS20P10-201ENST00000451209 253 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.22□□□□□ -1.73
NFKB1P19838 AC010469.1-201ENST00000463864 576 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.22□□□□□ -1.73
NFKB1P19838 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.22□□□□□ -1.73
NFKB1P19838 AC099522.1-202ENST00000514718 367 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 SNORA31.16-201ENST00000516773 139 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.22□□□□□ -1.73
NFKB1P19838 AC090897.2-201ENST00000581715 130 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 AC090616.3-201ENST00000582184 217 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.22□□□□□ -1.73
NFKB1P19838 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 AL078604.3-201ENST00000615580 211 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 MIR3653-201ENST00000625572 110 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 MIR7641-1-201ENST00000627518 61 ntBASIC4.22□□□□□ -1.73
NFKB1P19838 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NFKB1P19838 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NFKB1P19838 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NFKB1P19838 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
NFKB1P19838 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NFKB1P19838 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.21□□□□□ -1.74
NFKB1P19838 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms