Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX6-1P78426 MIR4425-201ENST00000580572 84 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AC005014.2-201ENST00000607795 599 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX6-1P78426 AC119674.1-207ENST00000641355 633 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX6-1P78426 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX6-1P78426 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX6-1P78426 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX6-1P78426 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AC092268.1-201ENST00000342691 405 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RNU6-1010P-201ENST00000362757 107 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 SNORA38.1-201ENST00000364172 131 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 Y_RNA.252-201ENST00000364556 101 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX6-1P78426 Y_RNA.504-201ENST00000384481 104 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 Y_RNA.577-201ENST00000384794 101 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NKX6-1P78426 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RNU2-23P-201ENST00000410545 195 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RN7SKP61-201ENST00000410642 295 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 MTCYBP10-201ENST00000424905 650 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX6-1P78426 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AC244670.1-201ENST00000436879 112 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 GPM6BP3-201ENST00000442797 145 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RPS29P31-201ENST00000446147 164 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX6-1P78426 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AL163540.1-201ENST00000485382 386 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RPL36AP48-201ENST00000485521 314 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 RN7SKP83-201ENST00000516512 178 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AL590705.4-201ENST00000532209 134 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 AC007458.1-201ENST00000542812 373 ntBASIC3.16□□□□□ -1.9
NKX6-1P78426 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX6-1P78426 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX6-1P78426 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX6-1P78426 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX6-1P78426 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NKX6-1P78426 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.9
NKX6-1P78426 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.15□□□□□ -1.9
NKX6-1P78426 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
NKX6-1P78426 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.9
NKX6-1P78426 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.15□□□□□ -1.9
NKX6-1P78426 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
NKX6-1P78426 Y_RNA.5-201ENST00000362334 102 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 RNU6-212P-201ENST00000362642 104 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 Y_RNA.326-201ENST00000365176 113 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 RNU6-1083P-201ENST00000384022 107 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 U3.26-201ENST00000391236 204 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 MTCYBP2-201ENST00000407745 171 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 RNA5SP120-201ENST00000410900 112 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 AC007098.1-201ENST00000420122 367 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 AC018865.2-201ENST00000423631 129 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.15□□□□□ -1.91
NKX6-1P78426 AL353705.4-201ENST00000449661 238 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX6-1P78426 RNU6-120P-201ENST00000516077 103 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 ELOCP31-201ENST00000540463 467 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 AC008011.1-201ENST00000545989 227 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX6-1P78426 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX6-1P78426 AC060766.3-201ENST00000591442 263 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 MIR7851-201ENST00000610611 160 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX6-1P78426 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX6-1P78426 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX6-1P78426 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NKX6-1P78426 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX6-1P78426 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX6-1P78426 ZNF826P-207ENST00000622273 1910 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 AP000560.1-201ENST00000624150 1937 ntBASIC3.15□□□□□ -1.91
NKX6-1P78426 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX6-1P78426 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX6-1P78426 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX6-1P78426 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX6-1P78426 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX6-1P78426 AL359854.1-201ENST00000614203 1594 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 Y_RNA.28-201ENST00000362554 111 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RNU6-99P-201ENST00000364721 107 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RNU4-9P-201ENST00000364951 139 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RNU6-1286P-201ENST00000383871 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms