Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 AC018630.3-201ENST00000542637 96 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 AC002545.1-201ENST00000592511 181 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 DUXAP11-201ENST00000603858 526 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 AL355598.1-201ENST00000604169 202 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 Z98751.3-201ENST00000604447 521 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 MIR2909-201ENST00000617113 69 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 AC130454.1-201ENST00000622948 401 ntBASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.11□□□□□ -2.43
GAFA1Q96PS6 Y_RNA.40-201ENST00000362645 93 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RNU6-878P-201ENST00000384578 110 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AF228730.1-201ENST00000397972 663 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AL590556.1-201ENST00000423231 483 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 MTND1P28-201ENST00000435623 950 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 DAP3P1-201ENST00000441522 278 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 CECR9-201ENST00000453421 199 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AC048334.1-201ENST00000477975 159 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AC010460.2-201ENST00000509054 677 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 RNA5SP290-201ENST00000517133 127 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 HMGB1P33-201ENST00000563485 527 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AC126177.8-201ENST00000618339 1015 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 AC009269.6-201ENST00000621778 588 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 ZNF849P-201ENST00000594711 1566 ntBASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.12□□□□□ -2.43
GAFA1Q96PS6 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 MIR411-201ENST00000362239 96 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AL451054.2-201ENST00000420896 202 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AC005534.2-201ENST00000431047 433 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AL008629.1-201ENST00000438615 184 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AC007395.1-201ENST00000451333 677 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 RPS27AP8-201ENST00000452665 445 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 RNU6-965P-201ENST00000516721 96 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AC104417.1-201ENST00000523974 751 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AL356057.1-201ENST00000533798 831 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 AC012065.4-201ENST00000602445 679 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
GAFA1Q96PS6 ENSAP3-201ENST00000312710 333 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 RNU6-944P-201ENST00000364023 107 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 RNU6-743P-201ENST00000364151 106 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 RNU6-658P-201ENST00000384606 106 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 RNU6-700P-201ENST00000391043 107 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC067940.1-201ENST00000458411 300 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 RNA5SP481-201ENST00000516814 122 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 IGJP1-201ENST00000522682 475 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC023050.2-201ENST00000544968 387 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC008127.2-201ENST00000549925 1075 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC010620.1-201ENST00000601088 1102 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC107952.2-201ENST00000606048 486 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC034229.4-201ENST00000607861 441 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 MIR6779-201ENST00000617283 64 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 AC120349.3-201ENST00000624377 529 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 MIR4275-201ENST00000636486 87 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 MTND5P16-201ENST00000460269 1703 ntBASIC-0.14□□□□□ -2.43
GAFA1Q96PS6 DHFRP6-201ENST00000401776 268 ntBASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 RAD1P2-201ENST00000446414 663 ntBASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC002381.1-201ENST00000447049 280 ntBASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 RNU6-528P-201ENST00000516926 100 ntBASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.15□□□□□ -2.43
GAFA1Q96PS6 AC012557.2-201ENST00000605919 418 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms