Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 RNU6-1301P-201ENST00000362724 104 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 RNU6-326P-201ENST00000365480 107 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 RNU6-47P-201ENST00000383866 107 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 AL033519.2-201ENST00000403958 392 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 AL358453.1-201ENST00000422522 250 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 FABP5P15-201ENST00000453566 214 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 RPL21P104-201ENST00000464143 478 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 AL121603.1-201ENST00000553815 142 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 HMGB1P14-201ENST00000557424 591 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.86□□□□□ -1.79
EPHB3P54753 AC060766.3-201ENST00000591442 263 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 AC007179.3-201ENST00000604976 235 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 AC011921.3-201ENST00000605540 361 ntBASIC3.86□□□□□ -1.79
EPHB3P54753 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.86□□□□□ -1.79
EPHB3P54753 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
EPHB3P54753 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EPHB3P54753 USP8P1-201ENST00000494673 3183 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
EPHB3P54753 AC008725.1-201ENST00000605123 2263 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
EPHB3P54753 SNORD9-201ENST00000362566 104 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 SNORA53-201ENST00000391141 249 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
EPHB3P54753 RPL19P1-201ENST00000411635 428 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.85□□□□□ -1.79
EPHB3P54753 RPL21P40-201ENST00000428586 483 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 CYCSP4-201ENST00000429682 331 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.85□□□□□ -1.79
EPHB3P54753 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.85□□□□□ -1.79
EPHB3P54753 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.85□□□□□ -1.79
EPHB3P54753 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 AC002545.1-201ENST00000592511 181 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 AL162424.1-201ENST00000602325 221 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 MIR7851-201ENST00000610611 160 ntBASIC3.85□□□□□ -1.79
EPHB3P54753 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
EPHB3P54753 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EPHB3P54753 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.85□□□□□ -1.79
EPHB3P54753 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
EPHB3P54753 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.85□□□□□ -1.79
EPHB3P54753 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.85□□□□□ -1.79
EPHB3P54753 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
EPHB3P54753 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
EPHB3P54753 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
EPHB3P54753 Y_RNA.123-201ENST00000363338 102 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 RNA5SP50-201ENST00000363731 107 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 Y_RNA.240-201ENST00000364469 95 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 RNU6-740P-201ENST00000364734 105 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 Y_RNA.292-201ENST00000364904 97 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.84□□□□□ -1.79
EPHB3P54753 TOMM20P4-201ENST00000427861 435 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 AC091021.1-201ENST00000468051 388 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 RPS26P21-201ENST00000475397 348 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 Y_RNA.662-201ENST00000516028 97 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 SNORD116-28-201ENST00000516123 91 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 SNORA31.20-201ENST00000517111 133 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 AC022559.1-201ENST00000520905 205 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 AL645944.1-201ENST00000603857 493 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 AC011476.5-201ENST00000615594 130 ntBASIC3.84□□□□□ -1.79
EPHB3P54753 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.84□□□□□ -1.79
EPHB3P54753 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
EPHB3P54753 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
EPHB3P54753 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.8
EPHB3P54753 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
EPHB3P54753 MFSD8-236ENST00000641509 4050 ntBASIC3.84□□□□□ -1.8
EPHB3P54753 ZNF826P-207ENST00000622273 1910 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EPHB3P54753 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EPHB3P54753 HAUS6P2-201ENST00000433254 2404 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 AC004925.1-201ENST00000624256 2706 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHB3P54753 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.83□□□□□ -1.8
EPHB3P54753 RNU6-858P-201ENST00000362436 107 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 RNU6-428P-201ENST00000362942 107 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 RNU4-9P-201ENST00000364951 139 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 RNA5SP235-201ENST00000365411 114 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 MIR10A-201ENST00000385043 110 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 MIR514A1-201ENST00000385133 98 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 RNA5SP306-201ENST00000411087 107 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 RPL23AP83-201ENST00000434984 473 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.83□□□□□ -1.8
EPHB3P54753 RNU6-346P-201ENST00000516288 111 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 RNU2-31P-201ENST00000516954 155 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 MIR4282-201ENST00000583613 67 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 AP001485.1-201ENST00000604799 199 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 AC096577.2-201ENST00000611455 153 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 MIR7975-201ENST00000619350 68 ntBASIC3.83□□□□□ -1.8
EPHB3P54753 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EPHB3P54753 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHB3P54753 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHB3P54753 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms