Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AL645568.3-201ENST00000433683 316 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 HMGB1P31-201ENST00000437242 427 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AC007969.2-201ENST00000441891 191 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AC093259.1-201ENST00000509755 300 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 COPS8P3-201ENST00000526024 482 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AP000873.5-201ENST00000533906 236 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AC008521.1-201ENST00000587471 187 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 RMST_4.1-201ENST00000616886 107 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR1248-201ENST00000629190 106 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR9-3-201ENST00000385084 90 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU2-39P-201ENST00000410604 198 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AC098592.1-201ENST00000419352 333 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 MTND4P20-201ENST00000424125 869 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 snoU13.26-201ENST00000459452 105 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 RPL30P12-201ENST00000474666 353 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AC117522.1-201ENST00000509821 380 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AC091135.1-201ENST00000585943 307 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 TUSC7.1-201ENST00000610969 165 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AL078595.3-201ENST00000623815 1166 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 AC006927.3-201ENST00000638789 384 ntBASIC1.53□□□□□ -2.16
CCNB1IP1Q9NPC3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 CBX3P1-201ENST00000325243 554 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RNU6-500P-201ENST00000362349 107 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RNU6-78P-201ENST00000362897 107 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RNU6-743P-201ENST00000364151 106 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RNU6-61P-201ENST00000365528 109 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AL589872.1-201ENST00000426602 288 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RPL7P54-201ENST00000438336 674 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 snoU13.15-201ENST00000459407 104 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 RBBP4P6-201ENST00000508098 202 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 MTND2P7-201ENST00000521337 640 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AC011494.1-201ENST00000596454 237 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AC022022.2-201ENST00000602989 360 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AL451064.1-201ENST00000607718 471 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 uc_338.5-201ENST00000611839 155 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 AC026585.1-201ENST00000619582 524 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCNB1IP1Q9NPC3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 MIR1261-201ENST00000408659 82 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AL512286.1-201ENST00000439244 400 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AL035666.1-201ENST00000446195 348 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 RPL39P29-201ENST00000447779 157 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 MTND2P39-201ENST00000457230 764 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 RPS29P11-201ENST00000496507 171 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 FAM206BP-201ENST00000510179 541 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AC009646.1-201ENST00000510455 318 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AF131216.2-201ENST00000512316 564 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AL356057.1-201ENST00000533798 831 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AC137800.2-201ENST00000574375 120 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 AC008751.2-201ENST00000597885 980 ntBASIC1.51□□□□□ -2.17
CCNB1IP1Q9NPC3 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 321.6 ms