Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SEPT7P4-201ENST00000437076 306 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AC012308.1-201ENST00000451232 178 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 RPL26P9-201ENST00000457466 433 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AC020890.1-201ENST00000491837 504 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 SNORD116-25-201ENST00000516517 92 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AP002001.1-203ENST00000534002 267 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 AC007224.1-201ENST00000564410 144 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 MIR3160-1-201ENST00000577972 85 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 ZFRP1-201ENST00000457579 2970 ntBASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB9Q9Y5E1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 RNU6-600P-201ENST00000362524 99 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 RPL21P17-201ENST00000397467 475 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 RN7SKP53-201ENST00000411337 315 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 Y_RNA.637-201ENST00000459424 114 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 RNU6-426P-201ENST00000516464 97 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 MIR3939-201ENST00000582614 106 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 AL365222.1-201ENST00000614661 98 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 Y_RNA.778-201ENST00000620203 90 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 MIR3674-201ENST00000636576 68 ntBASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB9Q9Y5E1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB9Q9Y5E1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB9Q9Y5E1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB9Q9Y5E1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB9Q9Y5E1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB9Q9Y5E1 FAM35BP-202ENST00000497389 3337 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 RNU1-64P-201ENST00000365443 163 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AL732292.1-201ENST00000426692 226 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 RPL7AP28-201ENST00000464513 571 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC090525.1-201ENST00000479116 478 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 RPS29P20-201ENST00000489592 171 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC015795.1-201ENST00000513669 327 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC115990.1-201ENST00000526957 301 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC021739.1-201ENST00000559631 174 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AC105129.1-201ENST00000560250 297 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 AL034408.1-202ENST00000636088 415 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 USP8P1-201ENST00000494673 3183 ntBASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB9Q9Y5E1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 OR56B2P-202ENST00000641377 2453 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 AC007656.2-201ENST00000624902 4547 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 RNU1-62P-201ENST00000362599 164 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 MIR549A-201ENST00000385268 96 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 Y_RNA.629-201ENST00000411368 105 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 RNA5SP103-201ENST00000459503 118 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 RPL36AP41-201ENST00000493820 306 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 RNA5SP468-201ENST00000516782 93 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 MIR2116-201ENST00000517221 80 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 AC009127.3-201ENST00000570531 403 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 MIR3684-201ENST00000579779 74 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 AC005255.1-201ENST00000593748 216 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 VN1R85P-201ENST00000601587 426 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 AP005019.3-201ENST00000620418 560 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 AC011944.2-201ENST00000624440 683 ntBASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB9Q9Y5E1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms