Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC006020.1-201ENST00000420179 1854 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 OR4G2P-201ENST00000328113 903 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-384P-201ENST00000364900 104 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP126-201ENST00000365092 109 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 Y_RNA.436-201ENST00000384097 102 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-72P-201ENST00000384285 79 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-45P-201ENST00000384471 107 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RPS4XP7-201ENST00000406274 780 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RNU2-66P-201ENST00000410650 161 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 RNU4-46P-201ENST00000410818 138 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC016691.1-201ENST00000441321 413 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC012308.1-201ENST00000451232 178 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 MTCO3P7-201ENST00000510008 774 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 MTND3P5-201ENST00000512798 333 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC109329.1-201ENST00000518744 317 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 NDUFA8P1-201ENST00000605525 367 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC004908.3-201ENST00000610248 625 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AC007336.1-201ENST00000576365 3828 ntBASIC2.25□□□□□ -2.05
ATG4BQ9Y4P1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 OR56A5-201ENST00000340110 738 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP240-201ENST00000365355 128 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP508-201ENST00000411327 119 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MTCYBP8-201ENST00000422855 651 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MTCO2P19-201ENST00000427513 598 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 CALM1P1-201ENST00000442082 433 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC112771.1-201ENST00000463581 102 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MED28P2-201ENST00000475771 317 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 HMGB1P29-201ENST00000505659 499 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC091133.4-201ENST00000511142 308 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 BNIP3P6-201ENST00000549284 499 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AL133241.1-201ENST00000556832 487 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MTATP6P3-201ENST00000581686 676 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC004223.2-201ENST00000590309 544 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC104073.3-201ENST00000610942 955 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 AC005858.4-201ENST00000623191 700 ntBASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.24□□□□□ -2.05
ATG4BQ9Y4P1 MTND5P26-201ENST00000426018 1752 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-942P-201ENST00000363002 107 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 Y_RNA.194-201ENST00000363985 102 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU4-24P-201ENST00000364565 139 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU4-75P-201ENST00000364621 146 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-259P-201ENST00000383999 107 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU1-52P-201ENST00000384190 164 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-843P-201ENST00000384454 104 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 SNORA80E-201ENST00000384744 137 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RNU2-16P-201ENST00000410712 136 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AL353193.1-201ENST00000421444 268 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 DLGAP5P1-201ENST00000430307 464 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RN7SL636P-201ENST00000497504 294 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 MTCO3P9-201ENST00000506989 781 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AC074344.1-201ENST00000512823 224 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AP005902.1-201ENST00000521358 186 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms