Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
TRAV13-1A0A0B4J241 AC211469.2-201ENST00000605461 205 ntBASIC0.62□□□□□ -2.31
TRAV13-1A0A0B4J241 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
TRAV13-1A0A0B4J241 MIR378A-201ENST00000362177 66 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 Y_RNA.40-201ENST00000362645 93 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 SNORD114-2-201ENST00000363953 78 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 SNORA40C-201ENST00000391285 128 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 UBE2V1P10-201ENST00000414685 269 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 PIGFP2-201ENST00000421400 651 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 MTCO1P3-201ENST00000429327 192 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC132479.1-201ENST00000449160 144 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 SNRPFP4-201ENST00000456366 242 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC112198.4-201ENST00000515450 351 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 RNU6-1092P-201ENST00000516955 87 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC137800.2-201ENST00000574375 120 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 OR4H6P-202ENST00000603819 340 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AL022345.2-201ENST00000606307 135 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC025754.2-201ENST00000606491 432 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AL021879.1-201ENST00000611756 288 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC120349.3-201ENST00000624377 529 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AC091895.1-201ENST00000624494 256 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AL136313.1-201ENST00000624804 202 ntBASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV13-1A0A0B4J241 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 Y_RNA.140-201ENST00000363474 103 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 RAC1P6-201ENST00000423911 575 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 ZFAND6P1-201ENST00000434138 605 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 RPS27P1-201ENST00000450552 247 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AL353752.1-201ENST00000454946 260 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 RPL18AP17-201ENST00000455326 198 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 snoU13.14-201ENST00000459372 104 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AL163195.1-201ENST00000496941 348 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 RN7SKP219-201ENST00000516825 296 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 RNU6-143P-201ENST00000516942 93 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AC123767.1-202ENST00000620407 817 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AC092656.1-203ENST00000624134 423 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 AL079343.1-201ENST00000572358 1771 ntBASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV13-1A0A0B4J241 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 RNU6-622P-201ENST00000384272 103 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 MIR548B-201ENST00000385247 97 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 BX664727.1-201ENST00000416024 466 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AL606490.4-201ENST00000423117 127 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 CBX3P6-201ENST00000430257 527 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC079776.3-201ENST00000450665 370 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC012308.1-201ENST00000451232 178 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 RNU1-131P-201ENST00000458943 161 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 RNA5SP269-201ENST00000459032 137 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 COX6CP14-201ENST00000469580 174 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 CYCSP23-201ENST00000519781 313 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC015712.3-201ENST00000559380 164 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC008088.1-201ENST00000580993 280 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC078795.2-201ENST00000602835 1252 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 BNIP3P9-201ENST00000603714 553 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC080078.3-201ENST00000605407 463 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AL589994.2-201ENST00000621124 579 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 OR4G3P-201ENST00000633500 913 ntBASIC0.59□□□□□ -2.31
TRAV13-1A0A0B4J241 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.32
TRAV13-1A0A0B4J241 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
TRAV13-1A0A0B4J241 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-744P-201ENST00000365557 107 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-1316P-201ENST00000384242 108 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-166P-201ENST00000384371 107 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU2-23P-201ENST00000410545 195 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 USP9YP33-201ENST00000412220 421 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms