Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 RASA4DP-201ENST00000460726 1199 ntBASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3TC1Q8TE82 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 HBZP1-201ENST00000354915 429 ntBASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 KRT8P3-201ENST00000519669 1449 ntBASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3TC1Q8TE82 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 KRT18P48-201ENST00000434763 852 ntBASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3TC1Q8TE82 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 AFG3L1P-217ENST00000557444 2447 ntBASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 HCG4P8-203ENST00000443049 980 ntBASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 MCCD1P1-208ENST00000445732 328 ntBASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 AC034232.1-201ENST00000506026 1064 ntBASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 KRT126P-201ENST00000549467 1181 ntBASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 MIR3180-5-201ENST00000583743 153 ntBASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3TC1Q8TE82 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 AC024243.1-201ENST00000609234 778 ntBASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3TC1Q8TE82 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 AC092597.1-201ENST00000487352 616 ntBASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.64■■□□□ 1.38
SH3TC1Q8TE82 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms