Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 AC233702.5-201ENST00000584107 538 ntBASIC18.34■□□□□ 0.53
KRT78Q8N1N4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT78Q8N1N4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT78Q8N1N4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.33■□□□□ 0.53
KRT78Q8N1N4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 MIR718-201ENST00000390190 70 ntBASIC18.33■□□□□ 0.52
KRT78Q8N1N4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 AC091390.4-202ENST00000476426 537 ntBASIC18.33■□□□□ 0.52
KRT78Q8N1N4 PRSS44-201ENST00000515154 1146 ntBASIC18.33■□□□□ 0.52
KRT78Q8N1N4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 AC011298.2-201ENST00000617989 482 ntBASIC18.33■□□□□ 0.52
KRT78Q8N1N4 AP006294.2-201ENST00000641667 209 ntBASIC18.33■□□□□ 0.52
KRT78Q8N1N4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT78Q8N1N4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.33■□□□□ 0.52
KRT78Q8N1N4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 MIR6786-201ENST00000616843 113 ntBASIC18.32■□□□□ 0.52
KRT78Q8N1N4 AL049637.2-201ENST00000641778 930 ntBASIC18.32■□□□□ 0.52
KRT78Q8N1N4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT78Q8N1N4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms