Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.76■□□□□ 0.75
RFX6Q8HWS3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 AL138781.2-201ENST00000617896 1843 ntBASIC19.76■□□□□ 0.75
RFX6Q8HWS3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 KRT8P41-201ENST00000533985 1514 ntBASIC19.75■□□□□ 0.75
RFX6Q8HWS3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX6Q8HWS3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 HTR7P1-201ENST00000538670 1336 ntBASIC19.74■□□□□ 0.75
RFX6Q8HWS3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX6Q8HWS3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 Z85996.1-201ENST00000494644 937 ntBASIC19.73■□□□□ 0.75
RFX6Q8HWS3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX6Q8HWS3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms