Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL1Q6NVV3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 FAM197Y1-201ENST00000421178 764 ntBASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NIPAL1Q6NVV3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 DGCR10-201ENST00000609839 495 ntBASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 AC026471.5-201ENST00000615068 467 ntBASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL1Q6NVV3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 AC116562.2-201ENST00000507042 360 ntBASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NIPAL1Q6NVV3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms