Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MTND1P18-201ENST00000448191 573 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RPS29P15-201ENST00000458329 171 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RNU6-333P-201ENST00000459117 107 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RNU7-180P-201ENST00000459240 63 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RPS27AP9-201ENST00000477681 438 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RN7SL432P-201ENST00000484057 298 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RNU6-277P-201ENST00000516272 106 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 RNU6-826P-201ENST00000516827 104 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC078814.3-201ENST00000553036 491 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC044792.1-201ENST00000593294 196 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC006023.1-201ENST00000603944 259 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC007742.2-201ENST00000618226 398 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC009248.2-201ENST00000619826 254 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 AC110491.1-201ENST00000562191 2010 ntBASIC2.91□□□□□ -1.94
DDX43Q9NXZ2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.9□□□□□ -1.94
DDX43Q9NXZ2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
DDX43Q9NXZ2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
DDX43Q9NXZ2 MTND4P35-201ENST00000604257 1375 ntBASIC2.9□□□□□ -1.94
DDX43Q9NXZ2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 NACAP2-201ENST00000318548 624 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 RNU6-61P-201ENST00000365528 109 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 RNU6-1029P-201ENST00000384109 107 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 RNU6-817P-201ENST00000391083 104 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 FO393413.1-201ENST00000402892 195 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.615-201ENST00000410769 117 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 NUP35P1-201ENST00000422734 947 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AC098831.1-201ENST00000440661 216 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 RNU7-182P-201ENST00000459009 62 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 MTCO3P9-201ENST00000506989 781 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.665-201ENST00000516177 98 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 RNU6-1314P-201ENST00000517139 104 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 ELOCP31-201ENST00000540463 467 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AC093027.1-201ENST00000546698 429 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 NACAP3-201ENST00000552100 481 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 SCOCP1-201ENST00000554676 349 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 MIR4703-201ENST00000577728 79 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 MIR4795-201ENST00000584182 89 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AL355598.1-201ENST00000604169 202 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AP000787.2-201ENST00000604432 568 ntBASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX43Q9NXZ2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RNU4-79P-201ENST00000362764 141 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 SNORD56.5-201ENST00000364281 72 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RNU6-641P-201ENST00000384006 107 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 SNORA24.1-201ENST00000384401 135 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 MIR627-201ENST00000384979 97 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RN7SKP32-201ENST00000410167 303 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC093106.2-201ENST00000428212 385 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 ERLEC1P1-201ENST00000433806 578 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC112220.1-201ENST00000434628 355 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 MRPL50P4-201ENST00000446432 475 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AL162395.1-201ENST00000457882 422 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC098591.2-201ENST00000510152 315 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RNU4-29P-201ENST00000515943 174 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RNU7-30P-201ENST00000516835 62 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RNU6-1092P-201ENST00000516955 87 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC105029.1-201ENST00000520250 669 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC243972.3-201ENST00000539655 198 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 PSMA3P-201ENST00000555485 635 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AL118558.2-201ENST00000556294 238 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 RPL12P50-201ENST00000603116 116 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AC005046.1-201ENST00000608515 625 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AL137003.2-201ENST00000606924 2538 ntBASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
DDX43Q9NXZ2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AC073343.1-201ENST00000328239 651 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms