Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC092185.1-201ENST00000491371 97 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AC018437.1-201ENST00000492214 406 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AC139453.3-201ENST00000493276 369 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AC093663.1-201ENST00000497190 394 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.56□□□□□ -1.84
PNKPQ96T60 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.56□□□□□ -1.84
PNKPQ96T60 RNU6-976P-201ENST00000516086 111 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 RNA5SP384-201ENST00000516615 116 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 RNU6-1137P-201ENST00000517073 99 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 IGKV2-26-201ENST00000518305 343 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 ATP5F1P5-201ENST00000526403 760 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AC011890.2-201ENST00000613393 294 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PNKPQ96T60 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
PNKPQ96T60 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.55□□□□□ -1.84
PNKPQ96T60 MFSD8-233ENST00000641482 4860 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PNKPQ96T60 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
PNKPQ96T60 Y_RNA.2-201ENST00000362330 96 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 U3.6-201ENST00000363622 211 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 Y_RNA.463-201ENST00000384271 102 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 MIR607-201ENST00000385241 96 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 RN7SKP111-201ENST00000410349 271 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 RNU6-293P-201ENST00000411259 106 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 VDAC1P3-201ENST00000434069 851 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AL035666.1-201ENST00000446195 348 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 FTH1P25-201ENST00000447665 469 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 RN7SL75P-201ENST00000461926 281 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 RPL23AP67-201ENST00000465341 474 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 RPS23P3-201ENST00000470993 430 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AP002884.2-201ENST00000471647 395 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 SCARNA16.2-201ENST00000516520 172 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 RNU6-1046P-201ENST00000516538 107 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC009902.1-201ENST00000519351 183 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AC025755.1-201ENST00000521306 278 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.55□□□□□ -1.84
PNKPQ96T60 HMGB1P14-201ENST00000557424 591 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC007938.3-201ENST00000604965 623 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 AC005000.2-201ENST00000605468 310 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.55□□□□□ -1.84
PNKPQ96T60 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PNKPQ96T60 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PNKPQ96T60 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PNKPQ96T60 AC116096.1-201ENST00000566804 2314 ntBASIC3.55□□□□□ -1.84
PNKPQ96T60 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.55□□□□□ -1.84
PNKPQ96T60 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PNKPQ96T60 AC008568.2-201ENST00000623862 2313 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PNKPQ96T60 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.54□□□□□ -1.84
PNKPQ96T60 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.54□□□□□ -1.84
PNKPQ96T60 RNU6-741P-201ENST00000383889 107 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 Y_RNA.459-201ENST00000384251 102 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 RNU6-842P-201ENST00000384269 107 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.54□□□□□ -1.84
PNKPQ96T60 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.54□□□□□ -1.84
PNKPQ96T60 PGBD4P6-201ENST00000421501 610 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AC018865.2-201ENST00000423631 129 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AC009237.8-201ENST00000445492 379 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AL583843.1-201ENST00000456070 346 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 FCF1P8-201ENST00000510322 597 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 Y_RNA.661-201ENST00000516003 99 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.54□□□□□ -1.84
PNKPQ96T60 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AC136443.5-201ENST00000603741 370 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AC007485.1-201ENST00000616755 206 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.54□□□□□ -1.84
PNKPQ96T60 PLCE1P1-201ENST00000622094 305 ntBASIC3.54□□□□□ -1.84
PNKPQ96T60 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.54□□□□□ -1.84
PNKPQ96T60 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.54□□□□□ -1.84
PNKPQ96T60 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.54□□□□□ -1.84
PNKPQ96T60 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PNKPQ96T60 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.53□□□□□ -1.84
PNKPQ96T60 MIR412-201ENST00000362142 91 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-37P-201ENST00000362692 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-11P-201ENST00000364234 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-7-201ENST00000364784 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-8-201ENST00000365467 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-25P-201ENST00000383873 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-1-201ENST00000383898 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-48P-201ENST00000384161 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-36P-201ENST00000384172 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-4P-201ENST00000384205 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-5P-201ENST00000384238 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-3P-201ENST00000384314 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-16P-201ENST00000384385 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-15P-201ENST00000384534 107 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms