Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 RNU6-1285P-201ENST00000363480 105 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 RNA5SP509-201ENST00000364577 119 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 RNU6-144P-201ENST00000383951 107 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 SNORA51.5-201ENST00000384126 131 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 MIR1302-5-201ENST00000408164 150 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 AC010618.1-201ENST00000469924 477 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 RN7SL41P-201ENST00000476144 297 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 MIR6716-201ENST00000613413 80 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 AL442128.1-201ENST00000615151 90 ntBASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC61Q9Y6R9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC61Q9Y6R9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC61Q9Y6R9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.46□□□□□ -1.37
CCDC61Q9Y6R9 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.46□□□□□ -1.37
CCDC61Q9Y6R9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC61Q9Y6R9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 AC021146.4-201ENST00000309229 279 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-136P-201ENST00000384663 107 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 MIRLET7F2-201ENST00000385277 83 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-837P-201ENST00000391056 108 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 AL359073.1-201ENST00000448036 403 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 snoU13.3-201ENST00000459441 104 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 MAPK10-328ENST00000641553 4009 ntBASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CCDC61Q9Y6R9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AL359693.1-201ENST00000614959 2407 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.368-201ENST00000365547 113 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 MIR450A2-201ENST00000385022 100 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-592P-201ENST00000411333 103 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 RPS20P14-201ENST00000412545 360 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 RPS26P42-201ENST00000413485 326 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AC093331.1-201ENST00000521474 169 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AC018630.3-201ENST00000542637 96 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 SNORD84-203ENST00000584275 78 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AC011944.2-201ENST00000624440 683 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AC068724.3-201ENST00000625906 87 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 AP001029.2-203ENST00000589795 4910 ntBASIC6.45□□□□□ -1.38
CCDC61Q9Y6R9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.163-201ENST00000363702 113 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 RNA5SP479-201ENST00000364858 117 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 RNU1-140P-201ENST00000365040 165 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 RNU11-201ENST00000387069 134 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AL031003.1-201ENST00000404229 172 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-855P-201ENST00000410395 104 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AL356387.2-201ENST00000422272 243 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 RNU7-141P-201ENST00000459304 62 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AC021231.3-201ENST00000558497 370 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AL031274.2-201ENST00000599419 203 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AL360012.1-201ENST00000602813 131 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 BX005214.3-202ENST00000619809 325 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 U6.99-201ENST00000637524 83 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 AC022336.2-201ENST00000568966 2538 ntBASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC61Q9Y6R9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 251.4 ms