Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MTATP6P15-201ENST00000527233 835 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR1273C-201ENST00000578669 77 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC174048.1-201ENST00000603389 144 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AP000860.1-201ENST00000605250 559 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC013244.3-201ENST00000605614 388 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC106052.1-201ENST00000608029 497 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 FRG1KP-201ENST00000623592 341 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNA5SP276-201ENST00000362580 94 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 U8.2-201ENST00000363156 134 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR518A2-201ENST00000384966 87 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 MTCO2P21-201ENST00000419780 677 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 RPL23AP42-201ENST00000471152 471 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC104685.1-201ENST00000502445 371 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC091965.2-201ENST00000512324 613 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU2-44P-201ENST00000516795 194 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AP001981.2-201ENST00000603241 418 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC018638.7-201ENST00000605836 1114 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC144521.1-201ENST00000607148 956 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC096772.1-201ENST00000609146 564 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC103710.2-201ENST00000609912 942 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AC130324.3-201ENST00000614165 542 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 AL354685.2-201ENST00000448218 1447 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.8□□□□□ -2.12
CCNB1IP1Q9NPC3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 SNORA75B-201ENST00000384053 137 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 SNORA64-201ENST00000384674 134 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-253P-201ENST00000384730 105 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 SNORA40.19-201ENST00000390846 128 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC008267.5-201ENST00000424928 265 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AL353777.1-201ENST00000425552 326 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 FCF1P6-201ENST00000456841 595 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AL139824.2-201ENST00000458731 1095 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 snoU109.1-201ENST00000459339 135 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 TRBV12-1-201ENST00000479785 344 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-201P-201ENST00000517100 61 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC123904.2-201ENST00000548059 300 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AC009269.6-201ENST00000621778 588 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 AL445984.1-201ENST00000637834 659 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 MTND4P9-201ENST00000507819 1346 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 MTND4P16-201ENST00000466108 1367 ntBASIC1.79□□□□□ -2.12
CCNB1IP1Q9NPC3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 SNORD114-19-201ENST00000363072 75 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-960P-201ENST00000364056 120 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-395P-201ENST00000365662 106 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU1-57P-201ENST00000384491 166 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-83P-201ENST00000384568 112 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-906P-201ENST00000384700 70 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RPS20P2-201ENST00000402520 389 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AL356432.1-201ENST00000405809 419 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC092809.3-201ENST00000415453 231 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AL158823.1-201ENST00000418441 478 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC027124.2-201ENST00000428249 105 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 MTND6P13-201ENST00000443510 523 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 MED28P2-201ENST00000475771 317 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms