Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHS1O60500 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPHS1O60500 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NPHS1O60500 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPHS1O60500 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHS1O60500 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
NPHS1O60500 AP000560.1-201ENST00000624150 1937 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 MFSD8-216ENST00000641147 4009 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
NPHS1O60500 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHS1O60500 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 SNORA60-201ENST00000362396 134 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 RNU6-336P-201ENST00000364891 107 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 RNU5E-7P-201ENST00000365290 117 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 Y_RNA.471-201ENST00000384312 102 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHS1O60500 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHS1O60500 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHS1O60500 BTF3L4P4-201ENST00000506381 449 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHS1O60500 RNA5SP143-201ENST00000516936 115 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHS1O60500 AC007458.1-201ENST00000542812 373 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.95□□□□□ -1.78
NPHS1O60500 AC234771.5-201ENST00000600161 514 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHS1O60500 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 MIR7151-201ENST00000617477 60 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 U6.99-201ENST00000637524 83 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
NPHS1O60500 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NPHS1O60500 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHS1O60500 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHS1O60500 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 OR56A5-201ENST00000340110 738 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 SNORA31-201ENST00000362607 130 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RNU6-227P-201ENST00000362865 103 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RNU6-78P-201ENST00000362897 107 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RNU1-132P-201ENST00000364300 164 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 Y_RNA.350-201ENST00000365409 98 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RNU6-72P-201ENST00000384285 79 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 MIR192-201ENST00000384915 110 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 MIR607-201ENST00000385241 96 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RNU2-38P-201ENST00000410856 79 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHS1O60500 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHS1O60500 AL500522.2-201ENST00000448562 343 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHS1O60500 RPS29P22-201ENST00000472363 168 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RN7SL481P-201ENST00000477764 299 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 RNU6-911P-201ENST00000516523 104 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 RNA5SP309-201ENST00000516670 106 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHS1O60500 AL590705.4-201ENST00000532209 134 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NPHS1O60500 TVP23BP1-201ENST00000557500 617 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AC025627.2-201ENST00000576220 160 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AC008962.1-201ENST00000605729 304 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 MIR7703-201ENST00000620784 77 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AC130454.1-201ENST00000622948 401 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 AC112200.1-201ENST00000625015 234 ntBASIC3.94□□□□□ -1.78
NPHS1O60500 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NPHS1O60500 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NPHS1O60500 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHS1O60500 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPHS1O60500 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPHS1O60500 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPHS1O60500 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 Y_RNA.105-201ENST00000363182 111 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 Y_RNA.123-201ENST00000363338 102 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 RNU6-140P-201ENST00000384566 108 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 MIR493-201ENST00000385254 89 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 RPS29P13-201ENST00000402041 169 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 RNU6-130P-201ENST00000411112 103 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.93□□□□□ -1.78
NPHS1O60500 AC092047.1-201ENST00000424997 240 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 COX6B1P7-201ENST00000430845 235 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
NPHS1O60500 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.93□□□□□ -1.78
NPHS1O60500 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.93□□□□□ -1.78
NPHS1O60500 MTND1P19-201ENST00000511780 315 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.93□□□□□ -1.78
NPHS1O60500 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.93□□□□□ -1.78
NPHS1O60500 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms